RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TGIF1Q15583 401 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 HIST2H2ACQ16777 129 aaPredicted RBP18.81■□□□□ 0.6
LIME1-205ENST00000480139 HIST2H2AA3Q6FI13 130 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 GRHL2Q6ISB3 625 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 TTLL10Q6ZVT0 673 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 HDXQ7Z353 690 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 IL22RA1Q8N6P7 574 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 L3MBTL4Q8NA19 623 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 NT5CQ8TCD5 201 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 NTMT1Q9BV86 223 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 RHBGQ9H310 441 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 ZBTB26Q9HCK0 441 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 OXSMQ9NWU1 459 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 DHCR7Q9UBM7 475 aaKnown RBP18.81■□□□□ 0.6
LIME1-205ENST00000480139 TSC22D4Q9Y3Q8 395 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 C21orf140B9A014 251 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 OR7A17O14581 309 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 KLK10O43240 276 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 SPAG7O75391 227 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 CREB1P16220 341 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 AGXTP21549 392 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 SERPINB1P30740 379 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 FAM53BQ14153 422 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 RBBP5Q15291 538 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 NDUFA9Q16795 377 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 UNC50Q53HI1 259 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 TMEM214Q6NUQ4 689 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 PRMT9Q6P2P2 845 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 LRRC69Q6ZNQ3 347 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 SPACA3Q8IXA5 215 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIME1-205ENST00000480139 LAS2Q8IYD9 372 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 CCDC63Q8NA47 563 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 TCP10LQ8TDR4 215 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 CREB3L4Q8TEY5 395 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 NAF1Q96HR8 494 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 MAGEB10Q96LZ2 347 aaPredicted RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 NSUN5Q96P11 429 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 FAM111AQ96PZ2 611 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 C17orf62Q9BQA9 187 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 EFHD1Q9BUP0 239 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 C12orf65Q9H3J6 166 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 NOL11Q9H8H0 719 aaKnown RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 ACTR8Q9H981 624 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 TMBIM4Q9HC24 238 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 ZMIZ1Q9ULJ6 1067 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 ZNF490Q9ULM2 529 aaPredicted RBP18.8■□□□□ 0.6
LIME1-205ENST00000480139 STK38LQ9Y2H1 464 aa18.8■□□□□ 0.6
LIME1-205ENST00000480139 MAP1BP46821 2468 aaKnown RBP18.79■□□□□ 0.6
LIME1-205ENST00000480139 TERTO14746 1132 aaKnown RBP18.79■□□□□ 0.6
LIME1-205ENST00000480139 NDUFS4O43181 175 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 CLEC3AO75596 197 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 CLDN9O95484 217 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 OTCP00480 354 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 SERPINA6P08185 405 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 CCNG1P51959 295 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 DCDP81605 110 aaKnown RBP18.79■□□□□ 0.6
LIME1-205ENST00000480139 CLCQ05315 142 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 RGS1Q08116 209 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 TRAF3Q13114 568 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 PCLAFQ15004 111 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 GGTA1PQ4G0N0 100 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 MED27Q6P2C8 311 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 ARMC2Q8NEN0 867 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 PPP4R1Q8TF05 950 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 MR1Q95460 341 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 KIAA1143Q96AT1 154 aaPredicted RBP18.79■□□□□ 0.6
LIME1-205ENST00000480139 RNF31Q96EP0 1072 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 SLC6A16Q9GZN6 736 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 SLC17A7Q9P2U7 560 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 CDC14AQ9UNH5 594 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 SLC22A7Q9Y694 548 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 DMXL2Q8TDJ6 3036 aa18.79■□□□□ 0.6
LIME1-205ENST00000480139 URB1O60287 2271 aaKnown RBP18.79■□□□□ 0.6
LIME1-205ENST00000480139 LOC101059948A0A1B0GTJ6 334 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 ANKDD1BA6NHY2 528 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 H0YIV9 168 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 AGPSO00116 658 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 TM9SF1O15321 606 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 PRPF4O43172 522 aaKnown RBP eCLIP18.78■□□□□ 0.69e-10■□□□□ 10.4
LIME1-205ENST00000480139 SUPT7LO94864 414 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 MED26O95402 600 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 MLYCDO95822 493 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 RAB40ALP0C0E4 278 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 PIM1P11309 404 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 ITGAXP20702 1163 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 ALAS2P22557 587 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 HPDP32754 393 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 TLE3Q04726 772 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 NKAIN1Q4KMZ8 207 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 C10orf62Q5T681 223 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 LIPMQ5VYY2 423 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 CT55Q8WUE5 264 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 ATP6V1E2Q96A05 226 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 TLCD1Q96CP7 247 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 REPS1Q96D71 796 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 DCBLD2Q96PD2 775 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 CCNL2Q96S94 520 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 GPR87Q9BY21 358 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms