RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CRYBB2P43320 205 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 EIF4HQ15056 248 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 DUSP6Q16828 381 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 KLHL22Q53GT1 634 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 EIF3MQ7L2H7 374 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 ADGRD2Q7Z7M1 963 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 KLHDC8BQ8IXV7 354 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 MS4A15Q8N5U1 240 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ZNF655Q8N720 491 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 OR11H7Q8NGC8 314 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ASB12Q8WXK4 309 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 NXPE3Q969Y0 559 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 FCRL5Q96RD9 977 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 REG4Q9BYZ8 158 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ABHD16BQ9H3Z7 469 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ZCCHC4Q9H5U6 513 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 RNF146Q9NTX7 359 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 TMEM45AQ9NWC5 275 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 MAP3K20Q9NYL2 800 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 PLEKHB1Q9UF11 243 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 EIF2B4Q9UI10 523 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 ACSL5Q9ULC5 683 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 CBX4O00257 560 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 IFRD1O00458 451 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 CA12O43570 354 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 KERAO60938 352 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ICAM3P32942 547 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 SCNN1AP37088 669 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 NDUFV1P49821 464 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 SLC10A6Q3KNW5 377 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 LGALSLQ3ZCW2 172 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 RHEBL1Q8TAI7 183 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 ATOH1Q92858 354 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 WNT8BQ93098 351 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 PCYT2Q99447 389 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 CRISPLD1Q9H336 500 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 RAB23Q9ULC3 237 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 SAMD4AQ9UPU9 718 aaKnown RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 BAIAP2Q9UQB8 552 aa20.52■□□□□ 0.88
SDF4-206ENST00000478938 TP53BP1Q12888 1972 aaPredicted RBP20.52■□□□□ 0.88
SDF4-206ENST00000478938 CDC7O00311 574 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PITPNM1O00562 1244 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ADAM11O75078 769 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 B3GALT4O96024 378 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 IQCF3P0C7M6 154 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PTX3P26022 381 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 SCRN3Q0VDG4 424 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 P2RY14Q15391 338 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 CCDC85BQ15834 202 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 CCDC117Q8IWD4 279 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 LIX1Q8N485 282 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 SRFBP1Q8NEF9 429 aaKnown RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 PRMT6Q96LA8 375 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 NPAS1Q99742 590 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 TMEM168Q9H0V1 697 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 MED28Q9H204 178 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 LDAHQ9H6V9 325 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 RANBP3Q9H6Z4 567 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 SLC28A3Q9HAS3 691 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 SCN1AP35498 2009 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 A0A0G2JMZ2 1700 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PRAMEF33A0A0G2JMD5 474 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ISM1B1AKI9 464 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 GMDSO60547 372 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PRAMEF10O60809 474 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PLATP00750 562 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 C1QCP02747 245 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 PCSK2P16519 638 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 GABRB1P18505 474 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 MAOBP27338 520 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ERVPABLB-1P60509 514 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 RPL38P63173 70 aaKnown RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 ZNF169Q14929 603 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 DDI2Q5TDH0 399 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ATG9BQ674R7 924 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ZNF551Q7Z340 670 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 LRRC17Q8N6Y2 441 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 DNAJC5GQ8N7S2 189 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 SLC25A46Q96AG3 418 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 MSLNLQ96KJ4 702 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 ZBTB18Q99592 522 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 CPPED1Q9BRF8 314 aaPredicted RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 MCOLN1Q9GZU1 580 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 TFB2MQ9H5Q4 396 aaKnown RBP20.51■□□□□ 0.87
SDF4-206ENST00000478938 SP110Q9HB58 689 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 NCKAP1Q9Y2A7 1128 aa20.51■□□□□ 0.87
SDF4-206ENST00000478938 HAS3O00219 553 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 HCN1O60741 890 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 NNMTP40261 264 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 LRRC32Q14392 662 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 PTPRRQ15256 657 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.5■□□□□ 0.87
SDF4-206ENST00000478938 DCAF15Q66K64 600 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 BHLHB9Q6PI77 547 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 FAM83AQ86UY5 434 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 PLPP6Q8IY26 295 aa20.5■□□□□ 0.87
SDF4-206ENST00000478938 C9orf43Q8TAL5 461 aaPredicted RBP20.5■□□□□ 0.87
SDF4-206ENST00000478938 P2RY13Q9BPV8 354 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms