RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 METTL21AQ8WXB1 218 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 PDLIM5Q96HC4 596 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 C16orf45Q96MC5 204 aaPredicted RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 NECTIN4Q96NY8 510 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 MGME1Q9BQP7 344 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 SNX25Q9H3E2 840 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 CHCHD3Q9NX63 227 aaKnown RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 RABL2AQ9UBK7 228 aaPredicted RBP3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 IGSF1Q8N6C5 1336 aa3.42□□□□□ -1.86
SMARCA1-204ENST00000478420 TRBV5-5A0A0J9YX44 114 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 A0A1W2PPW3 197 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ARHGEF37A1IGU5 675 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SNURFLB1AK76 121 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 C2CD4DB7Z1M9 353 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 MAGEC1O60732 1142 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SMPD2O60906 423 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 KRT33AO76009 404 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ZFAND5O76080 213 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 NXPH2O95156 264 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 MOCS3O95396 460 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 HMOX1P09601 288 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 EEF2P13639 858 aaKnown RBP3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 TCF4P15884 667 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 PDGFRAP16234 1089 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 EPORP19235 508 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 VEGFCP49767 419 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 TKTL1P51854 596 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 CAPZA1P52907 286 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 AKAP17AQ02040 695 aaKnown RBP3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 CACNG1Q06432 222 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 LRRC74AQ0VAA2 488 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 RPA4Q13156 261 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 CBX3Q13185 183 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SGCGQ13326 291 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 OPCMLQ14982 345 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 FCN2Q15485 313 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 EXT1Q16394 746 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 MEP1BQ16820 701 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 CTU2Q2VPK5 515 aaKnown RBP3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 KBTBD12Q3ZCT8 623 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 GPR33Q49SQ1 333 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 NHSL2Q5HYW2 709 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 BSPRYQ5W0U4 402 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 LYSMD4Q5XG99 296 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 KDELC1Q6UW63 502 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 PPP1R42Q7Z4L9 355 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SPATA21Q7Z572 469 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ABI3BPQ7Z7G0 1075 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 FAM219AQ8IW50 185 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 OR6S1Q8NH40 331 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 MAPK15Q8TD08 544 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 GATAD1Q8WUU5 269 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNRF4Q8WWF5 429 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 NSMAFQ92636 917 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 TRIM44Q96DX7 344 aaPredicted RBP3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 LINC00479Q96M42 142 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 CCDC114Q96M63 670 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 KRT12Q99456 494 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SPXQ9BT56 116 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 DGCR6LQ9BY27 220 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 SDCBP2Q9H190 292 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 C1orf21Q9H246 121 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ERAP1Q9NZ08 941 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 PKD2L2Q9NZM6 624 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 FBXL5Q9UKA1 691 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 LIPT1Q9Y234 373 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 ANGPTL3Q9Y5C1 460 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 PCDHGA1Q9Y5H4 931 aa3.41□□□□□ -1.86
SMARCA1-204ENST00000478420 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 IGKV3D-15A0A087WSY6 115 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SYNJ2BP-COX16A0A087WUM0 186 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A087WV48 116 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 C15orf61A6NNL5 157 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF263O14978 683 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 TEX28O15482 410 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 STX6O43752 255 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 BCAS2O75934 225 aaPredicted RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 CLDN1O95832 211 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 PNPP00491 289 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 ATP1B1P05026 303 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SERPING1P05155 500 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SUPT20HL2P0C7V6 817 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF883P0CG24 379 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 STAG3L1P0CL83 205 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 RPS2P15880 293 aaKnown RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SP100P23497 879 aaPredicted RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 RGS7P49802 495 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 LUMP51884 338 aaPredicted RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 ARFIP1P53367 373 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC26A5P58743 744 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 HTD2P86397 168 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 RBBP7Q16576 425 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 HFEQ30201 348 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 GLRA4Q5JXX5 417 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM65Q6PJ69 517 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms