RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 NEURL2Q9BR09 285 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 LZTS2Q9BRK4 669 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 EIF2B3Q9NR50 452 aaKnown RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 SEPT11Q9NVA2 429 aaKnown RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 FAM118AQ9NWS6 357 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 DDX43Q9NXZ2 648 aaKnown RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 TBC1D29Q9UFV1 150 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 LIMA1Q9UHB6 759 aaKnown RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 PILRBQ9UKJ0 227 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 ACSL5Q9ULC5 683 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 KIF26AQ9ULI4 1882 aaPredicted RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 URB1O60287 2271 aaKnown RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 PCDH15Q96QU1 1955 aa4.4□□□□□ -1.71
PRKD3-208ENST00000475912 MUC22E2RYF6 1773 aaPredicted RBP4.4□□□□□ -1.71
PRKD3-208ENST00000475912 NUP205Q92621 2012 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 UTP20O75691 2785 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SPENQ96T58 3664 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CTAGE9A4FU28 777 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SMCO2A6NFE2 343 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 E7EWF7 191 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TMEM189-UBE2V1I3L0A0 370 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 AP3D1O14617 1153 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 HS3ST1O14792 307 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 B3GAT3O94766 335 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SERPINF2P08697 491 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CTAGE8P0CG41 777 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CALM1P0DP23 149 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CALM2P0DP24 149 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CALM3P0DP25 149 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 NFKBIAP25963 317 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 AXLP30530 894 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SFNP31947 248 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 P2RY2P41231 377 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 APOBEC1P41238 236 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 ATXN3P54252 364 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 OLR1P78380 273 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 COG7P83436 770 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 MBTD1Q05BQ5 628 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 GFPT1Q06210 699 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 RUNX1T1Q06455 604 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 ELAVL2Q12926 359 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TRDNQ13061 729 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 RUNX3Q13761 415 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 LYSMD4Q5XG99 296 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SLC27A1Q6PCB7 646 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 LPCAT2Q7L5N7 544 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 GSTA5Q7RTV2 222 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 HAUS6Q7Z4H7 955 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 GLRX5Q86SX6 157 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 MAP7D3Q8IWC1 876 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CTAGE4Q8IX94 777 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 DEFB119Q8N690 84 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TSTD1Q8NFU3 115 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SLC44A1Q8WWI5 657 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 INTS12Q96CB8 462 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 RSRC1Q96IZ7 334 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 ST6GAL2Q96JF0 529 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 ZNF354BQ96LW1 612 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 HARBI1Q96MB7 349 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TRIM6Q9C030 488 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 GPR88Q9GZN0 384 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 CHMP4BQ9H444 224 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 DHX33Q9H6R0 707 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 SCPEP1Q9HB40 452 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 HAUS2Q9NVX0 235 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 NSMCE4AQ9NXX6 385 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 WRAP73Q9P2S5 460 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 VPS28Q9UK41 221 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 FBXL5Q9UKA1 691 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 YIPF1Q9Y548 306 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 KCNE2Q9Y6J6 123 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 FBN2P35556 2912 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TNRC6BQ9UPQ9 1833 aaKnown RBP4.39□□□□□ -1.71
PRKD3-208ENST00000475912 ABCA7Q8IZY2 2146 aa4.39□□□□□ -1.71
PRKD3-208ENST00000475912 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 A0A1B0GUA9 196 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 C1orf226A1L170 272 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 M0QZ24 198 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 EIF3DO15371 548 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PSMD10O75832 226 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 IGHV4-39P01824 125 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 GM2AP17900 193 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 HOXD13P35453 343 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 HADHAP40939 763 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 UBA7P41226 1012 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PTENP60484 403 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 RPL24P83731 157 aaKnown RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 PLIN5Q00G26 463 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 MAD2L1Q13257 205 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-208ENST00000475912 LY6DQ14210 128 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 EMC2Q15006 297 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 MED22Q15528 200 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 CCNG2Q16589 344 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 UPP1Q16831 310 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 DUOXA1Q1HG43 343 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 CDONQ4KMG0 1287 aa4.38□□□□□ -1.71
PRKD3-208ENST00000475912 GLRA4Q5JXX5 417 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms