RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 IMPA1P29218 277 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 AVPR1BP47901 424 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 EMP2P54851 167 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 SOX8P57073 446 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 RAB10P61026 200 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 VSNL1P62760 191 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 DSG2Q14126 1118 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 HKDC1Q2TB90 917 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 FAAH2Q6GMR7 532 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 TMEM207Q6UWW9 146 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 ISLR2Q6UXK2 745 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 MBOAT1Q6ZNC8 495 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 DTWD1Q8N5C7 304 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 ATL1Q8WXF7 558 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 CAVIN3Q969G5 261 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 PDLIM5Q96HC4 596 aaKnown RBP14.38□□□□□ -0.11
VARS-223ENST00000474643 MAGEB10Q96LZ2 347 aaPredicted RBP14.38□□□□□ -0.11
VARS-223ENST00000474643 PSMG3-AS1Q96PY0 264 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 EGFL8Q99944 293 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 TXLNGYQ9BZA5 131 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 ATG10Q9H0Y0 220 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 PLEKHB1Q9UF11 243 aaPredicted RBP14.38□□□□□ -0.11
VARS-223ENST00000474643 RUVBL1Q9Y265 456 aaKnown RBP14.38□□□□□ -0.11
VARS-223ENST00000474643 NAV2Q8IVL1 2488 aa14.38□□□□□ -0.11
VARS-223ENST00000474643 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 A0A087WUV0 522 aaPredicted RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 A1L4Q6 167 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 CCDC151A5D8V7 595 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 IDSB3KWA1 339 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 E7ENX8 843 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 POC1B-GALNT4F8VUJ3 575 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 CDC7O00311 574 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 ERLIN1O75477 346 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 DDAH2O95865 285 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 ONECUT2O95948 504 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 HPP00738 406 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 C1QAP02745 245 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 ENO2P09104 434 aaPredicted RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 CCDC166P0CW27 439 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 GRK3P35626 688 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 AP1S2P56377 157 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 TBPL1P62380 186 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 AP2B1P63010 937 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 YBX1P67809 324 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 ARG2P78540 354 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 TAP2Q03519 686 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 NAE1Q13564 534 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 PHKG1Q16816 387 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 VWA2Q5GFL6 755 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 MROH9Q5TGP6 573 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 GARNL3Q5VVW2 1013 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 AGTRAPQ6RW13 159 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 Q6ZS92 163 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 TAOK1Q7L7X3 1001 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 TBC1D1Q86TI0 1168 aaPredicted RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 TMEM151BQ8IW70 566 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 ANKRD49Q8WVL7 239 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 METTL21AQ8WXB1 218 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 C8orf44Q96CB5 159 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 C10orf90Q96M02 699 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 C5orf34Q96MH7 638 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 MCMBPQ9BTE3 642 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 UNKQ9C0B0 810 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 ACSS3Q9H6R3 686 aa14.37□□□□□ -0.11
VARS-223ENST00000474643 ZBTB20Q9HC78 741 aaPredicted RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 MKKSQ9NPJ1 570 aaPredicted RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
VARS-223ENST00000474643 CCDC88CQ9P219 2028 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 PCSK5Q92824 1860 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 A0A0A6YYC8 382 aaPredicted RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 VSTM2BA6NLU5 285 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 I3L1I5 382 aaPredicted RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 FFAR3O14843 346 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 HAT1O14929 419 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 GPR42O15529 346 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 SEMA7AO75326 666 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 WFS1O76024 890 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 ABHD2P08910 425 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CCND1P24385 295 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CRABP2P29373 138 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 EMP3P54852 163 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CSHL1Q14406 222 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 ZNF169Q14929 603 aaPredicted RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 TLR1Q15399 786 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 TSNQ15631 228 aaKnown RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 PRTGQ2VWP7 1150 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CAPN13Q6MZZ7 669 aaPredicted RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 FBXO42Q6P3S6 717 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 FAM180AQ6UWF9 173 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 NDUFAF7Q7L592 441 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CMC1Q7Z7K0 106 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 ADAMTSL2Q86TH1 951 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 CUZD1Q86UP6 607 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 PAQR7Q86WK9 346 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 GSPT2Q8IYD1 628 aaKnown RBP14.36□□□□□ -0.11
VARS-223ENST00000474643 SPATA6LQ8N4H0 392 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms