RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SLC22A7Q9Y694 548 aa19.26■□□□□ 0.67
PDLIM4-206ENST00000474421 FEZF1A0PJY2 475 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 RNF224P0DH78 156 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 IL1RNP18510 177 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 IL10P22301 178 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 XCR1P46094 333 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 AGTR2P50052 363 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 TNFSF10P50591 281 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 HERC3Q15034 1050 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 NIPAL1Q6NVV3 410 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 HIBCHQ6NVY1 386 aaPredicted RBP19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 CPEB2Q7Z5Q1 589 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 SLC26A11Q86WA9 606 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 OR56A3Q8NH54 315 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 FBXL8Q96CD0 374 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 SNF8Q96H20 258 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 PDLIM5Q96HC4 596 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 CAPZA3Q96KX2 299 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 IMMP1LQ96LU5 166 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 CYTH2Q99418 400 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 SARGQ9BW04 601 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 TEX264Q9Y6I9 313 aa19.25■□□□□ 0.67
PDLIM4-206ENST00000474421 DIDO1Q9BTC0 2240 aaKnown RBP19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 CCDC188H7C350 402 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 SGK494L7N484 410 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 E2F3O00716 465 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 NDC80O14777 642 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 PER3P56645 1201 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 GNG11P61952 73 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 HP1BP3Q5SSJ5 553 aaPredicted RBP19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 ABHD17BQ5VST6 288 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 PRSS41Q7RTY9 318 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 MAMDC2Q7Z304 686 aaPredicted RBP19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 STRA8Q7Z7C7 330 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 CREG2Q8IUH2 290 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 KCT2Q8NC54 265 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 OR4K1Q8NGD4 311 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 SUN3Q8TAQ9 357 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 ZCCHC10Q8TBK6 192 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 MACROD1Q9BQ69 325 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 SLX1AQ9BQ83 275 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 PLAC1Q9HBJ0 212 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 OLAHQ9NV23 265 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 PLA2G3Q9NZ20 509 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 HCN3Q9P1Z3 774 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 SLC17A6Q9P2U8 582 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 SAR1BQ9Y6B6 198 aa19.24■□□□□ 0.67
PDLIM4-206ENST00000474421 TRBC2A0A5B9 178 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 A1L4Q6 167 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 LCMT2O60294 686 aaKnown RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 JRKO75564 520 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 SEC31AO94979 1220 aaKnown RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 ITGAMP11215 1152 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 PAFAH1B1P43034 410 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 ITGA8P53708 1063 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 ILF2Q12905 390 aaKnown RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 PWP1Q13610 501 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 PLAG1Q6DJT9 500 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 TRMT10BQ6PF06 316 aaKnown RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 ANKRD7Q92527 254 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 PYCR2Q96C36 320 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 OR1F2PQ96R84 312 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 NAPGQ99747 312 aaPredicted RBP19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 ZFATQ9P243 1243 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 NAALAD2Q9Y3Q0 740 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 UNC79Q9P2D8 2635 aa19.23■□□□□ 0.67
PDLIM4-206ENST00000474421 NDUFS4O43181 175 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 OR1F1O43749 312 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 CELA2AP08217 269 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 EFNA3P52797 238 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 SNRPNP63162 240 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 RGS1Q08116 209 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 MGAT5Q09328 741 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 CSHL1Q14406 222 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 NKAPQ8N5F7 415 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 ANP32BQ92688 251 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 PWWP2AQ96N64 755 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 OLFM1Q99784 485 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 NSMCE4AQ9NXX6 385 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 STMN3Q9NZ72 180 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
PDLIM4-206ENST00000474421 RDH16O75452 317 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 SEC24DO94855 1032 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 GUCA1CO95843 209 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 WDPCPO95876 746 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 NOTCH2Q04721 2471 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 EXT1Q16394 746 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 BTBD16Q32M84 506 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 SBSNQ6UWP8 590 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 LANCL3Q6ZV70 420 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 ANKRD37Q7Z713 158 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 PDSS2Q86YH6 399 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 AFAP1L2Q8N4X5 818 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 PLPP5Q8NEB5 264 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 SLC5A11Q8WWX8 675 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 OR4K3Q96R72 315 aa19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 WDR83Q9BRX9 315 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-206ENST00000474421 TRIM51Q9BSJ1 452 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms