RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 RIC8BQ9NVN3 520 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 KLHL14Q9P2G3 628 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 ZFP69BQ9UJL9 534 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 SLC12A4Q9UP95 1085 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 KLK4Q9Y5K2 254 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 WDR87Q6ZQQ6 2873 aa7.98□□□□□ -1.13
CNN3-205ENST00000474409 CEP250Q9BV73 2442 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GOLGA8QA0A0J9YX86 632 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SPAARA0A1B0GVQ0 90 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ATP6AP2A0A1C7CYW4 349 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GOLGA8OA6NCC3 632 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 MAGEB17A8MXT2 336 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TMEM150CB9EJG8 249 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GOLGA8NF8WBI6 632 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 PRAMEF10O60809 474 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CTSVO60911 334 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CLEC3AO75596 197 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ATP6AP2O75787 350 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 FAM107AO95990 144 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 FTH1P19P0C7X4 201 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CDK4P11802 303 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 HSD3B1P14060 373 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ALOX15P16050 662 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 NELFEP18615 380 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 CSRP1P21291 193 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 HSD3B2P26439 372 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 PIK3CBP42338 1070 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 NOVA1P51513 510 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 NEK2P51955 445 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 RAP1GDS1P52306 607 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 PDX1P52945 283 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ARFIP2P53365 341 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 INHBCP55103 352 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 VSX2P58304 361 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 RPS13P62277 151 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 RPL38P63173 70 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 SIM1P81133 766 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 HMGCS1Q01581 520 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ZNF33BQ06732 778 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TRA2AQ13595 282 aaKnown RBP eCLIP7.97□□□□□ -1.13
CNN3-205ENST00000474409 KCNAB1Q14722 419 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GALNTL6Q49A17 601 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ATP6AP1LQ52LC2 224 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 XKR7Q5GH72 579 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TOR1AIP1Q5JTV8 583 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SPDYAQ5MJ70 313 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GKAP1Q5VSY0 366 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 NXNQ6DKJ4 435 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 FRMPD2BQ6IN97 320 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CYB5D1Q6P9G0 228 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 RNF165Q6ZSG1 346 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 MAVSQ7Z434 540 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 B3GNT8Q7Z7M8 397 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CSNK1A1LQ8N752 337 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 GBP7Q8N8V2 638 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 TTC29Q8NA56 475 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 CAMKVQ8NCB2 501 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TRPV3Q8NET8 790 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 RFWD2Q8NHY2 731 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ZCCHC10Q8TBK6 192 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ZNF473Q8WTR7 871 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 TUBGCP3Q96CW5 907 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CMTM7Q96FZ5 175 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SEC16BQ96JE7 1060 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SLC41A2Q96JW4 573 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 DEPDC7Q96QD5 511 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 SERPINI1Q99574 410 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 CCT7Q99832 543 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ELAC2Q9BQ52 826 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 SARGQ9BW04 601 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 MS4A8Q9BY19 250 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 ACPTQ9BZG2 426 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 STRADBQ9C0K7 418 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 RHBGQ9H310 441 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TUBB1Q9H4B7 451 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 COPS7BQ9H9Q2 264 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 MEAF6Q9HAF1 191 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 BRF2Q9HAW0 419 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 FAM60AQ9NP50 221 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 NMRK1Q9NWW6 199 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 AKAP7Q9P0M2 348 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 PILRAQ9UKJ1 303 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 PLCL2Q9UPR0 1127 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 APOBEC2Q9Y235 224 aaKnown RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 TSC22D4Q9Y3Q8 395 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 AP1M2Q9Y6Q5 423 aa7.97□□□□□ -1.13
CNN3-205ENST00000474409 PTPRZ1P23471 2315 aaPredicted RBP7.97□□□□□ -1.13
CNN3-205ENST00000474409 ZNF292O60281 2723 aa7.96□□□□□ -1.13
CNN3-205ENST00000474409 SPEGQ15772 3267 aa7.96□□□□□ -1.13
CNN3-205ENST00000474409 URADA6NGE7 173 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 H0YGG7 62 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 FOXE1O00358 373 aaPredicted RBP7.96□□□□□ -1.14
CNN3-205ENST00000474409 SDHDO14521 159 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 TXNDC9O14530 226 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 NDUFAB1O14561 156 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 SLC30A4O14863 429 aa7.96□□□□□ -1.14
CNN3-205ENST00000474409 P2RX6O15547 441 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms