RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RFPL1O75677 317 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 CD63P08962 238 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 MTHFD2P13995 350 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 IL1RNP18510 177 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 NR1D1P20393 614 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 MSH2P43246 934 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 SCTRP47872 440 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 AGTR2P50052 363 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 SERPINB9P50453 376 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 MAT1AQ00266 395 aaKnown RBP17.98■□□□□ 0.47
PTCD3-210ENST00000473829 CDC16Q13042 620 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 FAM53BQ14153 422 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 VWA2Q5GFL6 755 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 CCDC91Q7Z6B0 441 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 PRSS58Q8IYP2 241 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 CAMKVQ8NCB2 501 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 STT3BQ8TCJ2 826 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 ABHD17AQ96GS6 310 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 ING2Q9H160 280 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 VPS11Q9H270 941 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 DNAJC11Q9NVH1 559 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 ZNF358Q9NW07 568 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 ZNF282Q9UDV7 671 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-210ENST00000473829 CDC14AQ9UNH5 594 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 IKBKGQ9Y6K9 419 aa17.98■□□□□ 0.47
PTCD3-210ENST00000473829 TNRC6AQ8NDV7 1962 aaKnown RBP17.98■□□□□ 0.47
PTCD3-210ENST00000473829 SPENQ96T58 3664 aaKnown RBP17.97■□□□□ 0.47
PTCD3-210ENST00000473829 TRIM49D1C9J1S8 452 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 NDUFS4O43181 175 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 STK16O75716 305 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 IPO13O94829 963 aaKnown RBP17.97■□□□□ 0.47
PTCD3-210ENST00000473829 KLHL2O95198 593 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 ZGLP1P0C6A0 271 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 SLC35G6P0C7Q6 338 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 GNAZP19086 355 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 EPORP19235 508 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 KLC1Q07866 573 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 NFATC3Q12968 1075 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 NDUFA9Q16795 377 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 FAM83EQ2M2I3 478 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 PDSS2Q86YH6 399 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 AIF1LQ9BQI0 150 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 SLC25A18Q9H1K4 315 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 ANKZF1Q9H8Y5 726 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 CNOT10Q9H9A5 744 aaKnown RBP17.97■□□□□ 0.47
PTCD3-210ENST00000473829 TRPC4Q9UBN4 977 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 ZFP69BQ9UJL9 534 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 NXT1Q9UKK6 140 aaKnown RBP17.97■□□□□ 0.47
PTCD3-210ENST00000473829 HS3ST3B1Q9Y662 390 aa17.97■□□□□ 0.47
PTCD3-210ENST00000473829 CCNT2O60583 730 aaKnown RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 NSA2O95478 260 aaKnown RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 B3GALT4O96024 378 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 PDGFAP04085 211 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 S100BP04271 92 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 C1GALT1C1LP0DN25 315 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 SFTPCP11686 197 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 MMP11P24347 488 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 EFNA3P52797 238 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 SLBPQ14493 270 aaKnown RBP eCLIP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 SLC29A2Q14542 456 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 ATG9BQ674R7 924 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 TAOK1Q7L7X3 1001 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 LAPTM4BQ86VI4 370 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 EIF1ADQ8N9N8 165 aaKnown RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 SNX31Q8N9S9 440 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 RHEBL1Q8TAI7 183 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 C9orf43Q8TAL5 461 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 UBTD2Q8WUN7 234 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 MIEF2Q96C03 454 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 CRB3Q9BUF7 120 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 CD244Q9BZW8 370 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 ZNF71Q9NQZ8 489 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-210ENST00000473829 ACSS2Q9NR19 701 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 P4HTMQ9NXG6 502 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 GPRC5BQ9NZH0 403 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 TP53TG5Q9Y2B4 290 aa17.96■□□□□ 0.47
PTCD3-210ENST00000473829 C4orf51C9J302 202 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 SGK494L7N484 410 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 SOCS6O14544 535 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 PRPF4O43172 522 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTCD3-210ENST00000473829 KRT38O76015 456 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 SERPIND1P05546 499 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 CD22P20273 847 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 CNTFP26441 200 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 TNFRSF8P28908 595 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 AHRP35869 848 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 CCL11P51671 97 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 OCA2Q04671 838 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 HYAL2Q12891 473 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 ACAP2Q15057 778 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 RBBP5Q15291 538 aaKnown RBP17.95■□□□□ 0.46
PTCD3-210ENST00000473829 PDK4Q16654 411 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 TECRLQ5HYJ1 363 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 ZC3H7AQ8IWR0 971 aaKnown RBP17.95■□□□□ 0.46
PTCD3-210ENST00000473829 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTCD3-210ENST00000473829 AFAP1L2Q8N4X5 818 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 NT5CQ8TCD5 201 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 CREB3L4Q8TEY5 395 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 YIPF2Q9BWQ6 316 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 AICDAQ9GZX7 198 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms