RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SLCO2B1O94956 709 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CLDN7O95471 211 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 WNT1P04628 370 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CYC1P08574 325 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 OR52Z1P0C646 297 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 NHLRC4P0CG21 123 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 SRCP12931 536 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 P4HA1P13674 534 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 GNSP15586 552 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ACHEP22303 614 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CERS1P27544 350 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MPGP29372 298 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 BDKRB2P30411 391 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 GABRA5P31644 462 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TCF7P36402 384 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 RPL3P39023 403 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ME1P48163 572 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CXCR3P49682 368 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 DUSP3P51452 185 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ART1P52961 327 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CD81P60033 236 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 RBPJQ06330 500 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MZT1Q08AG7 82 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 AP1B1Q10567 949 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ST3GAL1Q11201 340 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SLC10A2Q12908 348 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 KLRB1Q12918 225 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ILKQ13418 452 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CTF1Q16619 201 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 HYAL4Q2M3T9 481 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 EIF2S3LQ2VIR3 472 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 CCDC158Q5M9N0 1113 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PPM1LQ5SGD2 360 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PIK3CD-AS1Q5SR53 167 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 WASHC2DQ5SRD0 308 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MARCH8Q5T0T0 291 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PLA2G4FQ68DD2 849 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TMEM71Q6P5X7 295 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 KCTD18Q6PI47 426 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 TRAT1Q6PIZ9 186 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 B3GNT6Q6ZMB0 384 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 Q6ZTK2 550 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 Q71RC1 249 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 BTN2A1Q7KYR7 527 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TRILQ7L0X0 811 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ECHDC2Q86YB7 292 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 C4orf19Q8IY42 314 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SYCP3Q8IZU3 236 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 XXYLT1Q8NBI6 393 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CHDHQ8NE62 594 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 GMCL1P1Q8NEA9 526 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MOSPD2Q8NHP6 518 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 RPLP0P6Q8NHW5 317 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 ARRDC2Q8TBH0 407 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 UTP15Q8TED0 518 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ROBO4Q8WZ75 1007 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SMARCD2Q92925 531 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TCEAL4Q96EI5 215 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CDHR1Q96JP9 859 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SFXN2Q96NB2 322 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MS4A10Q96PG2 267 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SH3GL2Q99962 352 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 WDR83Q9BRX9 315 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 C2orf40Q9H1Z8 148 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PNNQ9H307 717 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 MLXIPLQ9NP71 852 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SPAG4Q9NPE6 437 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 FZD3Q9NPG1 666 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 NRIP3Q9NQ35 241 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CNGB3Q9NQW8 809 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MBNL1Q9NR56 388 aaKnown RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.25□□□□□ -2.05
CALD1-216ENST00000473714 ABCB8Q9NUT2 735 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TMEM184CQ9NVA4 438 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 MCM9Q9NXL9 1143 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 WSB2Q9NYS7 404 aaPredicted RBP2.25□□□□□ -2.05
CALD1-216ENST00000473714 GTSE1Q9NYZ3 720 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 OR6C3Q9NZP0 311 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TBC1D7Q9P0N9 293 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 NYAP2Q9P242 653 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SLC9A2Q9UBY0 812 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 CDC14AQ9UNH5 594 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 SNX7Q9UNH6 387 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 LRP12Q9Y561 859 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 STON1Q9Y6Q2 735 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 TACC2O95359 2948 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
CALD1-216ENST00000473714 WDR19Q8NEZ3 1342 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CKAP5Q14008 2032 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 hDV102S1A0JD36 115 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SYCE3A1L190 88 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 GTPBP10A4D1E9 387 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 HTR3EA5X5Y0 456 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 OR6C76A6NM76 312 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 A6NNC1 897 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 HEPACAM2A8MVW5 462 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MS4A18H0YCH9 400 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TMEM189-UBE2V1I3L0A0 370 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 DDX39AO00148 427 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms