RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ACPTQ9BZG2 426 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 ZNF768Q9H5H4 540 aaKnown RBP18.35■□□□□ 0.53
PSPC1-203ENST00000471658 DMRT3Q9NQL9 472 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 ZFP69BQ9UJL9 534 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 CCL27Q9Y4X3 112 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 AP1M2Q9Y6Q5 423 aa18.35■□□□□ 0.53
PSPC1-203ENST00000471658 A0A0G2JND7 137 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 SRRM3A6NNA2 597 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 H0YGG7 62 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 EPHA3P29320 983 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 ARL4DP49703 201 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 IDH3AP50213 366 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 VSX2P58304 361 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 ARF3P61204 181 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 SNRPNP63162 240 aaKnown RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 HSD11B2P80365 405 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 ZFP36L1Q07352 338 aaKnown RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 ILKQ13418 452 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 CLPPQ16740 277 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 DHRS13Q6UX07 377 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 CARFQ8N187 725 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 OR52B2Q96RD2 323 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 AICDAQ9GZX7 198 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 OR51B5Q9H339 312 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 MEAF6Q9HAF1 191 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 STARD5Q9NSY2 213 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 PCNX2A6NKB5 2137 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 P2RX6O15547 441 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 DIAPH2O60879 1101 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 EIF2S1P05198 315 aaKnown RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 FOLR1P15328 257 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 NELFEP18615 380 aaKnown RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 AHRP35869 848 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 HK2P52789 917 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 INHBCP55103 352 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 RELAQ04206 551 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 XKR7Q5GH72 579 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 TRIM46Q7Z4K8 759 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 KIRREL3Q8IZU9 778 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 D2HGDHQ8N465 521 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 TBC1D19Q8N5T2 526 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 SLC13A3Q8WWT9 602 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 TMEM120AQ9BXJ8 343 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 NSRP1Q9H0G5 558 aaKnown RBP18.34■□□□□ 0.53
PSPC1-203ENST00000471658 KLHL31Q9H511 634 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 TSC22D4Q9Y3Q8 395 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 PCDHGA1Q9Y5H4 931 aa18.34■□□□□ 0.53
PSPC1-203ENST00000471658 DMXL1Q9Y485 3027 aa18.33■□□□□ 0.53
PSPC1-203ENST00000471658 FOXE1O00358 373 aaPredicted RBP18.33■□□□□ 0.52
PSPC1-203ENST00000471658 SAP18O00422 153 aaKnown RBP18.33■□□□□ 0.52
PSPC1-203ENST00000471658 TOX3O15405 576 aaPredicted RBP18.33■□□□□ 0.52
PSPC1-203ENST00000471658 ANKRD34CP0C6C1 535 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 PIK3CBP42338 1070 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 E2F1Q01094 437 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 HYAL2Q12891 473 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 C16orf72Q14CZ0 275 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 GPR19Q15760 415 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 HKDC1Q2TB90 917 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 SPATA21Q7Z572 469 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 ASPGQ86U10 573 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 CHCHD4Q8N4Q1 142 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 TM4SF19Q96DZ7 209 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 F2RL3Q96RI0 385 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 MS4A8Q9BY19 250 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 AKTIPQ9H8T0 292 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 KLHL14Q9P2G3 628 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 SLC12A4Q9UP95 1085 aa18.33■□□□□ 0.52
PSPC1-203ENST00000471658 COL27A1Q8IZC6 1860 aaPredicted RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 SERTM1A2A2V5 107 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 TRPC5OSA6NMA1 111 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 SLC28A1O00337 649 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 NDUFS4O43181 175 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 SNX3O60493 162 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 PEX11AO75192 247 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 FAM107AO95990 144 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 CSRP1P21291 193 aaKnown RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 HNRNPH1P31943 449 aaKnown RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 IMPG1Q17R60 797 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 ZC3H12BQ5HYM0 836 aaKnown RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 RNF165Q6ZSG1 346 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 PIGWQ7Z7B1 504 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 KMT5CQ86Y97 462 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 KCT2Q8NC54 265 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 TRPV3Q8NET8 790 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 WDR48Q8TAF3 677 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 C10orf82Q8WW14 230 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 TUBGCP3Q96CW5 907 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 THAP11Q96EK4 314 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 CHRNA10Q9GZZ6 450 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 PLCL2Q9UPR0 1127 aa18.32■□□□□ 0.52
PSPC1-203ENST00000471658 MDC1Q14676 2089 aaKnown RBP18.32■□□□□ 0.52
PSPC1-203ENST00000471658 SLC30A4O14863 429 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 CLEC3AO75596 197 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 FTH1P19P0C7X4 201 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 ARFIP2P53365 341 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 SIM1P81133 766 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 CSTF3Q12996 717 aaKnown RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 WASHC2DQ5SRD0 308 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 CDCP2Q5VXM1 449 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms