RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 FER1L5A0AVI2 2057 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 STX16-NPEPL1H3BU86 382 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 STX16O14662 325 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 FOXS1O43638 330 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 KLF7O75840 302 aaPredicted RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 PYGBP11216 843 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 EPB42P16452 691 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 EPORP19235 508 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 SLCO1A2P46721 670 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 OR1D4P47884 311 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 PIK3CGP48736 1102 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 RPS18P62269 152 aaKnown RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 CYP4F2P78329 520 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 IRF8Q02556 426 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 RGS1Q08116 209 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 ERV3-1Q14264 604 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 SLBPQ14493 270 aaKnown RBP eCLIP14.54□□□□□ -0.08
SDC3-203ENST00000471567 RBBP5Q15291 538 aaKnown RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 XKR6Q5GH73 641 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 PAGE2BQ5JRK9 111 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 C16orf46Q6P387 395 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 TMIGD1Q6UXZ0 262 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 COX15Q7KZN9 410 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 TMEM151AQ8N4L1 468 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 EPS8L3Q8TE67 593 aaKnown RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 COL26A1Q96A83 441 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 ROPN1BQ9BZX4 212 aaPredicted RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 ROPN1Q9HAT0 212 aaPredicted RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 DCDC2Q9UHG0 476 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 NXT1Q9UKK6 140 aaKnown RBP14.54□□□□□ -0.08
SDC3-203ENST00000471567 SLC22A7Q9Y694 548 aa14.54□□□□□ -0.08
SDC3-203ENST00000471567 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 SMIM23A6NLE4 172 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 H0YIG0 161 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 ERVH48-1M5A8F1 160 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 NDUFS4O43181 175 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 PRAMEF4O60810 478 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 WFS1O76024 890 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 NSA2O95478 260 aaKnown RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 PRKAR1AP10644 381 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 KRT15P19012 456 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 FBLP22087 321 aaKnown RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 AVPR1BP47901 424 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 NFKB2Q00653 900 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 IFFO1Q0D2I5 559 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 CHIT1Q13231 466 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 DSG2Q14126 1118 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 DOC2AQ14183 400 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 SSPNQ14714 243 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 SLC9A5Q14940 896 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 HIST2H2ACQ16777 129 aaPredicted RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 PRAMEF9Q5VWM5 478 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 HIST2H2AA3Q6FI13 130 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 NIPAL1Q6NVV3 410 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 SH2D5Q6ZV89 423 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 TEX9Q8N6V9 391 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 PTGR2Q8N8N7 351 aaPredicted RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 ANKRD53Q8N9V6 530 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 KCT2Q8NC54 265 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 OR2Y1Q8NGV0 311 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 THAP4Q8WY91 577 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 TTC9Q92623 222 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 WBP1Q96G27 269 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 UBL7Q96S82 380 aaPredicted RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 MACROD1Q9BQ69 325 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 TMEM216Q9P0N5 145 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 POLHQ9Y253 713 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 MRPS2Q9Y399 296 aaKnown RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 PTRH2Q9Y3E5 179 aaKnown RBP14.53□□□□□ -0.08
SDC3-203ENST00000471567 ANGPTL3Q9Y5C1 460 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 MAU2Q9Y6X3 613 aa14.53□□□□□ -0.08
SDC3-203ENST00000471567 IGLV3-12A0A075B6K2 115 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 A0A0A6YYC8 382 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 TLDC2A0PJX2 215 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 CDC14CA4D256 554 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 URADA6NGE7 173 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 VSTM2BA6NLU5 285 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 I3L1I5 382 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 GOLGA8RI6L899 631 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 TK2O00142 265 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 CNOT3O75175 753 aaKnown RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 STATHP02808 62 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 SERPINA6P08185 405 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 SBK3P0C264 359 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 TAC1P20366 129 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 FOLR3P41439 243 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 OCA2Q04671 838 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 COL9A2Q14055 689 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 HERC3Q15034 1050 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 NKG7Q16617 165 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 TBR1Q16650 682 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 AFAP1L2Q8N4X5 818 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 DTWD1Q8N5C7 304 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 METTL27Q8N6F8 245 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 LSM14AQ8ND56 463 aaKnown RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 OR2W6PQ8NHA6 318 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 ADAMTS17Q8TE56 1095 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 CREB3L4Q8TEY5 395 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms