RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SARAFQ96BY9 339 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 AP2M1Q96CW1 435 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 ECHDC3Q96DC8 303 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 IMP4Q96G21 291 aaKnown RBP6.12□□□□□ -1.43
PTCD3-208ENST00000469585 DCUN1D1Q96GG9 259 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 SPATA13Q96N96 652 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 SORCS2Q96PQ0 1159 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 FCRL5Q96RD9 977 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 SNX18Q96RF0 628 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 NAPGQ99747 312 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-208ENST00000469585 ZSCAN5AQ9BUG6 496 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 SPATA16Q9BXB7 569 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 VPS37BQ9H9H4 285 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 USP29Q9HBJ7 922 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 CPNE5Q9HCH3 593 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 MAGEE1Q9HCI5 957 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 FZD3Q9NPG1 666 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 PRDM8Q9NQV8 689 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 APOBEC3BQ9UH17 382 aaKnown RBP6.12□□□□□ -1.43
PTCD3-208ENST00000469585 ANAPC5Q9UJX4 755 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 ITM2BQ9Y287 266 aa6.12□□□□□ -1.43
PTCD3-208ENST00000469585 NUP205Q92621 2012 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SPTY2D1-AS1A0A0U1RR47 76 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 A0A1B0GTQ1 180 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 C5orf60A6NFR6 353 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 KIF2AO00139 706 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TRAFD1O14545 582 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 AQP9O43315 295 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TNFSF14O43557 240 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 PRAMEF2O60811 474 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 C1QL1O75973 258 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ACTL6BO94805 426 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SLC25A14O95258 325 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TUBB4AP04350 444 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 APEHP13798 732 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 CASQ1P31415 396 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 AKT1P31749 480 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 RGRP47804 291 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 MARCKSL1P49006 195 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 METAP1P53582 386 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 CLDN2P57739 230 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TAS2R38P59533 333 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 BASP1P80723 227 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SLC10A2Q12908 348 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TRAF2Q12933 501 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ZBTB17Q13105 803 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SNX1Q13596 522 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 GALNT3Q14435 633 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 NFATC4Q14934 902 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 IRF4Q15306 451 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TRIP6Q15654 476 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ZRSR2Q15696 482 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 CCNG2Q16589 344 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TAZQ16635 292 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 PDPK2PQ6A1A2 396 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 PNCKQ6P2M8 343 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 KLHL17Q6TDP4 642 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 NLRP9Q7RTR0 991 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 BCDIN3DQ7Z5W3 292 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ABI3BPQ7Z7G0 1075 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TRABD2AQ86V40 505 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SLC13A5Q86YT5 568 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 GALNT13Q8IUC8 556 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SLC44A2Q8IWA5 706 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ZNF567Q8N184 647 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 GALNT15Q8N3T1 639 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 SLC25A41Q8N5S1 370 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 FAM71DQ8N9W8 422 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 FAM98AQ8NCA5 519 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 OR6C4Q8NGE1 309 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 OR56A4Q8NGH8 313 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 BRSK1Q8TDC3 778 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 LMX1AQ8TE12 382 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 HEXDCQ8WVB3 486 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 WDR60Q8WVS4 1066 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 FAM131CQ96AQ9 280 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 DTD2Q96FN9 168 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 HIC2Q96JB3 615 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TBL1YQ9BQ87 522 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TMEM121Q9BTD3 319 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 APOOQ9BUR5 198 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 FICDQ9BVA6 458 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TSSK1BQ9BXA7 367 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 GSDMCQ9BYG8 508 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TMPRSS5Q9H3S3 457 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 GAR1Q9NY12 217 aaKnown RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ASIC5Q9NY37 505 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 NLGN3Q9NZ94 848 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 AKAP7Q9P0M2 348 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 RNF14Q9UBS8 474 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 APPL1Q9UKG1 709 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 PCDHGB3Q9Y5G1 929 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 PTPRZ1P23471 2315 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-208ENST00000469585 ABCA7Q8IZY2 2146 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 EML5Q05BV3 1969 aa6.11□□□□□ -1.43
PTCD3-208ENST00000469585 TRPM6Q9BX84 2022 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 CHD5Q8TDI0 1954 aa6.1□□□□□ -1.43
PTCD3-208ENST00000469585 ZFHX2Q9C0A1 2572 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-208ENST00000469585 NPIPB15A6NHN6 443 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms