RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, human

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT3A-208	ENST00000466601	LIPJ	Q5W064	366 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	GRHL2	Q6ISB3	625 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	RPS27L	Q71UM5	84 aa	Known RBP	13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	DSEL	Q8IZU8	1212 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	TRPV3	Q8NET8	790 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	TTL	Q8NG68	377 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	PROKR1	Q8TCW9	393 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	MR1	Q95460	341 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	L3HYPDH	Q96EM0	354 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	DCBLD2	Q96PD2	775 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	MACROD1	Q9BQ69	325 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	VIPAS39	Q9H9C1	493 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	ACSS2	Q9NR19	701 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	NDOR1	Q9UHB4	597 aa		13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.78	□□□□□ -0.2
DNMT3A-208	ENST00000466601		A0A1B0GX78	115 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ANKDD1B	A6NHY2	528 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DSCR3	O14972	297 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NDUFS4	O43181	175 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	UGDH	O60701	494 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MED26	O95402	600 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CLDN9	O95484	217 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SERPIND1	P05546	499 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TSPAN8	P19075	237 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	AGXT	P21549	392 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GSTM2	P28161	218 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ARL1	P40616	181 aa	Predicted RBP	13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	STAT5A	P42229	794 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CCNG1	P51959	295 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PWP1	Q13610	501 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RBBP7	Q16576	425 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NDUFA9	Q16795	377 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ZNF385C	Q66K41	422 aa	Predicted RBP	13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MED27	Q6P2C8	311 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LRRC69	Q6ZNQ3	347 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MYLK4	Q86YV6	388 aa	Predicted RBP	13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	C10orf107	Q8IVU9	208 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ARHGEF39	Q8N4T4	335 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CCNYL1	Q8N7R7	359 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	L3MBTL4	Q8NA19	623 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	KCT2	Q8NC54	265 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	OR52B6	Q8NGF0	335 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NT5C	Q8TCD5	201 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TRPC4AP	Q8TEL6	797 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	UBE2E3	Q969T4	207 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MOCOS	Q96EN8	888 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	C10orf90	Q96M02	699 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	GBP5	Q96PP8	586 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NTMT1	Q9BV86	223 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	KCNK9	Q9NPC2	374 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	OXSM	Q9NWU1	459 aa		13.77	□□□□□ -0.21
DNMT3A-208	ENST00000466601	WDFY3	Q8IZQ1	3526 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LOC101059948	A0A1B0GTJ6	334 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PPP6C	O00743	305 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	OTC	P00480	354 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TCN2	P20062	427 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NAGLU	P54802	743 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DCD	P81605	110 aa	Known RBP	13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RGS1	Q08116	209 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TRAF3	Q13114	568 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PCLAF	Q15004	111 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LIPM	Q5VYY2	423 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LCN10	Q6JVE6	187 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TMEM214	Q6NUQ4	689 aa	Known RBP	13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MILR1	Q7Z6M3	343 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SPACA3	Q8IXA5	215 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	LAS2	Q8IYD9	372 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CREB3L4	Q8TEY5	395 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TLCD1	Q96CP7	247 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SEC16B	Q96JE7	1060 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CDK15	Q96Q40	435 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DPH2	Q9BQC3	489 aa	Predicted RBP	13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CHST8	Q9H2A9	424 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RHBG	Q9H310	441 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CROT	Q9UKG9	612 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ZMIZ1	Q9ULJ6	1067 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	RNF11	Q9Y3C5	154 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PCDHGA11	Q9Y5H2	935 aa		13.76	□□□□□ -0.21
DNMT3A-208	ENST00000466601		A0A087WV48	116 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TM9SF1	O15321	606 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PRPF4	O43172	522 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	TRIM13	O60858	407 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	CLEC3A	O75596	197 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MLYCD	O95822	493 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SERPINA6	P08185	405 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ATXN8OS	P0DMR3	200 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	PCNA	P12004	261 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ALDH3A1	P30838	453 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	DLST	P36957	453 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ETV4	P43268	484 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	MAGOH	P61326	146 aa	Known RBP	13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	NAA20	P61599	178 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SNRPN	P63162	240 aa	Known RBP	13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	ASPH	Q12797	758 aa		13.75	□□□□□ -0.21
DNMT3A-208	ENST00000466601	SRSF6	Q13247	344 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms