RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 HUNKP57058 714 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 DCDC1P59894 354 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 ZRANB3Q5FWF4 1079 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 FAAP20Q6NZ36 180 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 TRIM65Q6PJ69 517 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 ZNF614Q8N883 585 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 ATAD1Q8NBU5 361 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 OR4C15Q8NGM1 316 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.68□□□□□ -1.82
LRCH3-211ENST00000466054 AFAP1L1Q8TED9 768 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 BSCL2Q96G97 398 aaPredicted RBP3.68□□□□□ -1.82
LRCH3-211ENST00000466054 PIGQQ9BRB3 760 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 C10orf88Q9H8K7 445 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 GRPEL1Q9HAV7 217 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 PHPT1Q9NRX4 125 aaPredicted RBP3.68□□□□□ -1.82
LRCH3-211ENST00000466054 EXOC1Q9NV70 894 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 VPS18Q9P253 973 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 LEF1Q9UJU2 399 aaPredicted RBP3.68□□□□□ -1.82
LRCH3-211ENST00000466054 FBXL4Q9UKA2 621 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 RUVBL2Q9Y230 463 aaKnown RBP3.68□□□□□ -1.82
LRCH3-211ENST00000466054 KLK4Q9Y5K2 254 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 MYH15Q9Y2K3 1946 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 NPHP3Q7Z494 1330 aa3.68□□□□□ -1.82
LRCH3-211ENST00000466054 TP53BP1Q12888 1972 aaPredicted RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 A0A0B4J203 849 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 ILVBLA1L0T0 632 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 SLU7O95391 586 aaKnown RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 KRT3P12035 628 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 LBPP18428 481 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 AADACP22760 399 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 TCF7P36402 384 aaPredicted RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 TSFMP43897 325 aaKnown RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 OR3A3P47888 321 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 OR1D5P58170 312 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 CDH18Q13634 790 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 CASC4Q6P4E1 433 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 MEX3DQ86XN8 651 aaKnown RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 KLHL7Q8IXQ5 586 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 NHLRC2Q8NBF2 726 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 OR4D10Q8NGI6 311 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 CHURC1Q8WUH1 139 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 SLCO2A1Q92959 643 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 EXOC4Q96A65 974 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 POM121L2Q96KW2 1035 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 LINC00479Q96M42 142 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 NSMCE3Q96MG7 304 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 TSSK2Q96PF2 358 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 PARK7Q99497 189 aaKnown RBP3.67□□□□□ -1.82
LRCH3-211ENST00000466054 HOXD1Q9GZZ0 328 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 PANK4Q9NVE7 773 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 SLCO1C1Q9NYB5 712 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 DNAJB9Q9UBS3 223 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 PILRBQ9UKJ0 227 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 ANGPTL3Q9Y5C1 460 aa3.67□□□□□ -1.82
LRCH3-211ENST00000466054 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 TRBV4-1A0A0J9YWV2 114 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 A0A1W2PR80 420 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MTMR11A4FU01 709 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 KBTBD13C9JR72 458 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 PRSS46E5RG02 174 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 SLC1A7O00341 560 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MAGEC1O60732 1142 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 CYTIPO60759 359 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 CEACAM4O75871 244 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 SUPT20HL2P0C7V6 817 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 RBMS1P29558 406 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 DUTP33316 252 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 OPRL1P41146 370 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 IER3P46695 156 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 KRT83P78385 493 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 TRA2AQ13595 282 aaKnown RBP eCLIP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 TMEM132DQ14C87 1099 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MEP1BQ16820 701 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MTHFSDQ2M296 383 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 NHSL2Q5HYW2 709 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 FAM46CQ5VWP2 391 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 CREBRFQ8IUR6 639 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 SGF29Q96ES7 293 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 ZNF486Q96H40 463 aaPredicted RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 RBM41Q96IZ5 413 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 ZNF300Q96RE9 604 aaPredicted RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 PYGO2Q9BRQ0 406 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 PI4K2AQ9BTU6 479 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MCRIP2Q9BUT9 160 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 DGCR6LQ9BY27 220 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 NACAP1Q9BZK3 213 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 WWTR1Q9GZV5 400 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 MED20Q9H944 212 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 COPS7BQ9H9Q2 264 aaPredicted RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 TUFT1Q9NNX1 390 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 HACD3Q9P035 362 aa3.66□□□□□ -1.82
LRCH3-211ENST00000466054 PA2G4Q9UQ80 394 aaKnown RBP3.66□□□□□ -1.82
LRCH3-211ENST00000466054 FAM170AA1A519 330 aa3.65□□□□□ -1.83
LRCH3-211ENST00000466054 NKX6-3A6NJ46 265 aa3.65□□□□□ -1.83
LRCH3-211ENST00000466054 SDR42E2A6NKP2 422 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms