RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 AGRPO00253 132 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 SDHDO14521 159 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 MAP3K7O43318 606 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 AHRP35869 848 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 ARFIP2P53365 341 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 HSD11B2P80365 405 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 RELAQ04206 551 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 CLPPQ16740 277 aaPredicted RBP12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 IMPG1Q17R60 797 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 XKR7Q5GH72 579 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 C10orf62Q5T681 223 aaPredicted RBP12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 RNF44Q7L0R7 432 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 TTLQ8NG68 377 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 TUBGCP3Q96CW5 907 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 DMRT3Q9NQL9 472 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 ADGRE2Q9UHX3 823 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 AP1M2Q9Y6Q5 423 aa12.21□□□□□ -0.45
SUPT20H-204ENST00000464572 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC28A1O00337 649 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 FOXE1O00358 373 aaPredicted RBP12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 NDUFAB1O14561 156 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 TOX3O15405 576 aaPredicted RBP12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 RFPL3O75679 317 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 ETHE1O95571 254 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 THRAP10827 490 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 PHEXP78562 749 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 ZNF33BQ06732 778 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 KCNAB1Q14722 419 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 RNF165Q6ZSG1 346 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 VN1R4Q7Z5H5 301 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 DNAJC22Q8N4W6 341 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 GBP7Q8N8V2 638 aaPredicted RBP12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 WDR48Q8TAF3 677 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 C10orf82Q8WW14 230 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC13A3Q8WWT9 602 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 OR51B5Q9H339 312 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 TOR4AQ9NXH8 423 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 GIMAP2Q9UG22 337 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC12A4Q9UP95 1085 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 CCL27Q9Y4X3 112 aa12.21□□□□□ -0.46
SUPT20H-204ENST00000464572 NDUFS4O43181 175 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 RGS14O43566 566 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 PEX11AO75192 247 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 EIF2S1P05198 315 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 ILKQ13418 452 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 NR6A1Q15406 480 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 ZC3H12BQ5HYM0 836 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SPDYAQ5MJ70 313 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 PHF19Q5T6S3 580 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 NXNQ6DKJ4 435 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 ARHGAP22Q7Z5H3 698 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 MCATQ8IVS2 390 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 TRPV3Q8NET8 790 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 CREB3L4Q8TEY5 395 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 KLHL6Q8WZ60 621 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SLC41A2Q96JW4 573 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 MAELQ96JY0 434 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 RILPQ96NA2 401 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 ZNF768Q9H5H4 540 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 AKTIPQ9H8T0 292 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 BRF2Q9HAW0 419 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SERTM1A2A2V5 107 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 H0YGG7 62 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 CLEC3AO75596 197 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 NELFEP18615 380 aaKnown RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 GSTM2P28161 218 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SERPINB1P30740 379 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 ARF3P61204 181 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 E2F1Q01094 437 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 GKAP1Q5VSY0 366 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 B3GNT8Q7Z7M8 397 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 KMT5CQ86Y97 462 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SLITRK4Q8IW52 837 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 NETO1Q8TDF5 533 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 RERGQ96A58 199 aaPredicted RBP12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 RIC8BQ9NVN3 520 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 VPS29Q9UBQ0 182 aa12.2□□□□□ -0.46
SUPT20H-204ENST00000464572 SAP18O00422 153 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 ANKRD34CP0C6C1 535 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 HSD3B1P14060 373 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 HSD3B2P26439 372 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 VSX2P58304 361 aaPredicted RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 LSM12Q3MHD2 195 aaKnown RBP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 ACAD11Q709F0 780 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 GLRX5Q86SX6 157 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 ASPGQ86U10 573 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 D2HGDHQ8N465 521 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 CMTM7Q96FZ5 175 aa12.19□□□□□ -0.46
SUPT20H-204ENST00000464572 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms