RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RBPJQ06330 500 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 ACSM1Q08AH1 577 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 MFAP5Q13361 173 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 RAPSNQ13702 412 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 KCNC3Q14003 757 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CEBPEQ15744 281 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CBWD6Q4V339 395 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CBWD3Q5JTY5 395 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 BHLHB9Q6PI77 547 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 RBM43Q6ZSC3 357 aaKnown RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 ADIPOR2Q86V24 386 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 P2RY8Q86VZ1 359 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 PLD3Q8IV08 490 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 FAM219AQ8IW50 185 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 SERPINA12Q8IW75 414 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CDH26Q8IXH8 852 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 SCYL3Q8IZE3 742 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 FAM133AQ8N9E0 248 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 TSPAN14Q8NG11 270 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 RNASE8Q8TDE3 154 aaKnown RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 DNASE1L2Q92874 299 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 TMEM186Q96B77 213 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 GIMAP5Q96F15 307 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 COG3Q96JB2 828 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CEP295NLQ96MC4 621 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 ABHD6Q9BV23 337 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 EDEM2Q9BV94 578 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 TEX13AQ9BXU3 409 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CCSER1Q9C0I3 900 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CRLF2Q9HC73 371 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 DNAJC17Q9NVM6 304 aaKnown RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 TMOD3Q9NYL9 352 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 ITGA11Q9UKX5 1188 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CFAP45Q9UL16 551 aa3.66□□□□□ -1.82
ITGB1-208ENST00000464001 CAB39Q9Y376 341 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 COL5A2P05997 1499 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-208ENST00000464001 TEX13DA0A0J9YY54 714 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 A0A1W2PPM1 405 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ELOVL7A1L3X0 281 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CTAGE15A4D2H0 777 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 O00370 1275 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SLC30A4O14863 429 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HCRTR2O43614 444 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF217O75362 1048 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SPAG6O75602 509 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 MT-ATP6P00846 226 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HIST1H2ABP04908 130 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 EDN1P05305 212 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 TCF4P15884 667 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 PRLRP16471 622 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 VCLP18206 1134 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HIST1H2ADP20671 130 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HOXD10P28358 340 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HSPA1LP34931 641 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SERPINB6P35237 376 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SOX6P35712 828 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 WNT5AP41221 380 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SSR1P43307 286 aaKnown RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CSRP3P50461 194 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 PTENP60484 403 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CXCL9Q07325 125 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SNX1Q13596 522 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 DPYSQ14117 519 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 GAMTQ14353 236 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 MXD4Q14582 209 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 PPP1R7Q15435 360 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 IMMTQ16891 758 aaKnown RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 MCMDC2Q4G0Z9 681 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 MDH1BQ5I0G3 518 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 LRIF1Q5T3J3 769 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ARHGEF16Q5VV41 709 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ACSM2BQ68CK6 577 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 KRT39Q6A163 491 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 TMEM211Q6ICI0 200 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 NEK5Q6P3R8 708 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 TPRG1Q6ZUI0 275 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HIST3H2AQ7L7L0 130 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ABI3BPQ7Z7G0 1075 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CTAGE6Q86UF2 777 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 NUDT13Q86X67 352 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 MFN1Q8IWA4 741 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 GPALPP1Q8IXQ4 340 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 HACE1Q8IYU2 909 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 KDM8Q8N371 416 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF614Q8N883 585 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CCNYQ8ND76 341 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 AGR3Q8TD06 166 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 GRHL3Q8TE85 626 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 THRSPQ92748 146 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 CASP10Q92851 521 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 EXT2Q93063 718 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ST6GALNAC6Q969X2 333 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 SLC47A1Q96FL8 570 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 ZNF560Q96MR9 790 aa3.65□□□□□ -1.83
ITGB1-208ENST00000464001 GCOM2Q9BZD3 368 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-208ENST00000464001 FZD8Q9H461 694 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms