RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 FOXS1O43638 330 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 OR1F1O43749 312 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 CNOT3O75175 753 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 MED26O95402 600 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 RBP1P09455 135 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 FAM87AP0C7U9 286 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 IL10P22301 178 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 MMP11P24347 488 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 HPDP32754 393 aaPredicted RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 NFKB2Q00653 900 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 LAPTM5Q13571 262 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 HERC3Q15034 1050 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 PDK4Q16654 411 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 UBAP2Q5T6F2 1119 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 TMPRSS11BQ86T26 416 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 HPS6Q86YV9 775 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 C9orf43Q8TAL5 461 aaPredicted RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 KCTD4Q8WVF5 259 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 NXNL1Q96CM4 212 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 MRRFQ96E11 262 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 SPSB2Q99619 263 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 EFCAB11Q9BUY7 163 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 CD244Q9BZW8 370 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 SLC25A18Q9H1K4 315 aa12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 PCDHGA9Q9Y5G4 932 aaKnown RBP12.42□□□□□ -0.42
R3HDM1-213ENST00000463230 SUPT3HB4E1H0 165 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 KLK8O60259 260 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 LCMT2O60294 686 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 SUPT3HO75486 399 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 UMODP07911 640 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 OR1D4P47884 311 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 E2F2Q14209 437 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 LY6DQ14210 128 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 TBCCQ15814 346 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 CATSPEREQ5SY80 951 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 ADGRD1Q6QNK2 874 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 LRRN4CLQ8ND94 238 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 MIEF2Q96C03 454 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 TSNARE1Q96NA8 513 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 ANKHQ9HCJ1 492 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 FEZF1A0PJY2 475 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 NCF1BA6NI72 391 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 NCF1CA8MVU1 366 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 CEACAM4O75871 244 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 NCF1P14598 390 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 SERPINB1P30740 379 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 OTX2P32243 289 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 CASP2P42575 452 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 PAGE2BQ5JRK9 111 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 PPP1R32Q7Z5V6 425 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 AFAP1L2Q8N4X5 818 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 AMER3Q8N944 861 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 STT3BQ8TCJ2 826 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 UBE2E3Q969T4 207 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 PTCD3Q96EY7 689 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 MMABQ96EY8 250 aaPredicted RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 GPR78Q96P69 363 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 UNKQ9C0B0 810 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 ACSS2Q9NR19 701 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 CTSFQ9UBX1 484 aa12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
R3HDM1-213ENST00000463230 NBEAQ8NFP9 2946 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 A0A1W2PQ72 361 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 SERPINA6P08185 405 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ZGLP1P0C6A0 271 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 HSPA7P48741 367 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ALDH18A1P54886 795 aaKnown RBP12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 SOX8P57073 446 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ATP1A4Q13733 1029 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 SETDB1Q15047 1291 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ABHD13Q7L211 337 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 SNX31Q8N9S9 440 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ACMSDQ8TDX5 336 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 SLC6A16Q9GZN6 736 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 ING2Q9H160 280 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 VPS11Q9H270 941 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 MAU2Q9Y6X3 613 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 COL6A6A6NMZ7 2263 aa12.4□□□□□ -0.42
R3HDM1-213ENST00000463230 A0A0A6YYC8 382 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 IQANK1A0A1B0GTG1 560 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 ESPNB1AK53 854 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 TRIM49D1C9J1S8 452 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 I3L1I5 382 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 K7EPI3 171 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 AGPSO00116 658 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 NDUFS4O43181 175 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 MTHFD2P13995 350 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 GDF5P43026 501 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 KCNC1P48547 511 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms