RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TRIM54Q9BYV2 358 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 RNF32Q9H0A6 362 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 ABCF3Q9NUQ8 709 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 MKL2Q9ULH7 1088 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 SH2B3Q9UQQ2 575 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 PRRC2CQ9Y520 2896 aaKnown RBP8.67□□□□□ -1.02
BRCA1-207ENST00000461798 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
BRCA1-207ENST00000461798 DOCK10Q96BY6 2186 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 HEATR5BQ9P2D3 2071 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ANKUB1A6NFN9 424 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 FFAR3O14843 346 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 GPR42O15529 346 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 TTI1O43156 1089 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 C8orf89P0DMQ9 161 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 GRK3P35626 688 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CCR8P51685 355 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ITGA8P53708 1063 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ARL4CP56559 192 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 MAT1AQ00266 395 aaKnown RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 MGAT5Q09328 741 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ILF2Q12905 390 aaKnown RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 PWP1Q13610 501 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 SYT16Q17RD7 645 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 SBSNQ6UWP8 590 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 TMEM207Q6UWW9 146 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 MBOAT1Q6ZNC8 495 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 SLC26A11Q86WA9 606 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 KLHL7Q8IXQ5 586 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 PLPP5Q8NEB5 264 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CATSPER1Q8NEC5 780 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 OR51Q1Q8NH59 317 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 BRIX1Q8TDN6 353 aaKnown RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 GRHL3Q8TE85 626 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 FAR1Q8WVX9 515 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CFAP36Q96G28 342 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CAPZA3Q96KX2 299 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 OR4K3Q96R72 315 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 NAPGQ99747 312 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 MCMBPQ9BTE3 642 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 TUBB6Q9BUF5 446 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 VN1R1Q9GZP7 353 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CLK4Q9HAZ1 481 aaKnown RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ANKHQ9HCJ1 492 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 PPANQ9NQ55 473 aaKnown RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ARL15Q9NXU5 204 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 SLC17A6Q9P2U8 582 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 PLEKHB1Q9UF11 243 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-207ENST00000461798 CHMP2BQ9UQN3 213 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 DOPEY1Q5JWR5 2465 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 HIVEP3Q5T1R4 2406 aa8.66□□□□□ -1.02
BRCA1-207ENST00000461798 ICE1Q9Y2F5 2266 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 TRAV17A0A0B4J275 112 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 TRBC2A0A5B9 178 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 FEZF1A0PJY2 475 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 E2F3O00716 465 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NDC80O14777 642 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 WIPF1O43516 503 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 JRKO75564 520 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 LDLRP01130 860 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 RNF224P0DH78 156 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 CDH1P12830 882 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 EDN3P14138 238 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 ZNF37AP17032 561 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 AHRP35869 848 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PAFAH1B1P43034 410 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 XCR1P46094 333 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 TNFSF10P50591 281 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PGGT1BP53609 377 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 CDKL1Q00532 357 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 EEF1A2Q05639 463 aaKnown RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 HERC3Q15034 1050 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 ZNF324BQ6AW86 544 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PLAG1Q6DJT9 500 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 H3F3CQ6NXT2 135 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 CYS1Q717R9 158 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PRSS41Q7RTY9 318 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 CPEB2Q7Z5Q1 589 aaKnown RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 ZC3HC1Q86WB0 502 aaKnown RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PDSS2Q86YH6 399 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NKAPQ8N5F7 415 aaKnown RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 GPATCH11Q8N954 259 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 KCT2Q8NC54 265 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 BBOF1Q8ND07 529 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 OR1N1Q8NGS0 311 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NT5CQ8TCD5 201 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 METTL21AQ8WXB1 218 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 MACROD1Q9BQ69 325 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 SLX1AQ9BQ83 275 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 TRIM51Q9BSJ1 452 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NSMCE4AQ9NXX6 385 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 ZFATQ9P243 1243 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PTGFRNQ9P2B2 879 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms