RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 EXTL3O43909 919 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 FMO6PO60774 539 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 NME6O75414 186 aaPredicted RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 ZFAND5O76080 213 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SLC16A8O95907 504 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 DLATP10515 647 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 SLC2A2P11168 524 aaPredicted RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 SFTPDP35247 375 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 FRKP42685 505 aaPredicted RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 IER3P46695 156 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 LEPRP48357 1165 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 CLDN17P56750 224 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 OR1D5P58170 312 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 CSNK2BP67870 215 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ASIC1P78348 528 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 MYL7Q01449 175 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SP3Q02447 781 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 TRIM29Q14134 588 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ZNF74Q16587 644 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 MRGPRG-AS1Q2M3A8 158 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 TMEM30BQ3MIR4 351 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ADAMTSL4-AS1Q5T5F5 129 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 OR4C11Q6IEV9 310 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 TTC27Q6P3X3 843 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 CASC4Q6P4E1 433 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 PODNL1Q6PEZ8 512 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 PHLDB2Q86SQ0 1253 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 FAM9BQ8IZU0 186 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SYCP3Q8IZU3 236 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 LSMEM2Q8N112 164 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 CCDC63Q8NA47 563 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SLC37A3Q8NCC5 494 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 OR10G8Q8NGN5 311 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SLC26A7Q8TE54 656 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ZNRF4Q8WWF5 429 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 METTL21AQ8WXB1 218 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 SUSD6Q92537 303 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 TEKT1Q969V4 418 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 AZIN2Q96A70 460 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 FBXO17Q96EF6 278 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 BTBD9Q96Q07 612 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 LPAR4Q99677 370 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ATG101Q9BSB4 218 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 UTP14AQ9BVJ6 771 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 RBM4Q9BWF3 364 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 DNAI2Q9GZS0 605 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 LSG1Q9H089 658 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 UBQLN3Q9H347 655 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 EGLN3Q9H6Z9 239 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 PPANQ9NQ55 473 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.97□□□□□ -1.93
RFC4-211ENST00000460408 CNIH4Q9P003 139 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 VPS18Q9P253 973 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 EPHA6Q9UF33 1036 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 C19orf25Q9UFG5 118 aaPredicted RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 PRDM4Q9UKN5 801 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 PA2G4Q9UQ80 394 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 PPRC1Q5VV67 1664 aaKnown RBP2.97□□□□□ -1.93
RFC4-211ENST00000460408 SHROOM2Q13796 1616 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 ADCY10Q96PN6 1610 aa2.97□□□□□ -1.93
RFC4-211ENST00000460408 GRIN2AQ12879 1464 aa2.96□□□□□ -1.93
RFC4-211ENST00000460408 RIMS1Q86UR5 1692 aaKnown RBP2.96□□□□□ -1.94
RFC4-211ENST00000460408 TRAV18A0A075B6X5 111 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 MEIOCA2RUB1 952 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 KBTBD13C9JR72 458 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 H3BMM5 538 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 CTDSPLO15194 276 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 EDIL3O43854 480 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 YES1P07947 543 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 HMBSP08397 361 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 ITIH1P19827 911 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 CRIP2P52943 208 aaPredicted RBP2.96□□□□□ -1.94
RFC4-211ENST00000460408 ST8SIA6P61647 398 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 TRA2AQ13595 282 aaKnown RBP eCLIP2.96□□□□□ -1.94
RFC4-211ENST00000460408 KBTBD12Q3ZCT8 623 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 IQCCQ4KMZ1 466 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 GLRA4Q5JXX5 417 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 SLC10A5Q5PT55 438 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 FUT10Q6P4F1 479 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 ARHGAP11AQ6P4F7 1023 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 Q6ZSR9 355 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 PIGWQ7Z7B1 504 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 PRUNE1Q86TP1 453 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 TUSC5Q8IXB3 177 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 CCDC170Q8IYT3 715 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 GPC2Q8N158 579 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 PRSS35Q8N3Z0 413 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 FAM89BQ8N5H3 189 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 NIPA2Q8N8Q9 360 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 DDHD1Q8NEL9 900 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 DUX3Q96PT4 197 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 ALKBH7Q9BT30 221 aaPredicted RBP2.96□□□□□ -1.94
RFC4-211ENST00000460408 FUCA2Q9BTY2 467 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 SRD5A3Q9H8P0 318 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 ABCB8Q9NUT2 735 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 DNAJC17Q9NVM6 304 aaKnown RBP2.96□□□□□ -1.94
RFC4-211ENST00000460408 IL36AQ9UHA7 158 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 PILRBQ9UKJ0 227 aa2.96□□□□□ -1.94
RFC4-211ENST00000460408 AGTPBP1Q9UPW5 1226 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms