RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ETV3P41162 512 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 CLCN2P51788 898 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SCML4Q8N228 414 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 LINC00471Q8N535 108 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 CSNK1G1Q9HCP0 422 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SPO11Q9Y5K1 396 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 FAM92AA1XBS5 289 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 TSPAN6O43657 245 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 HPRP00739 348 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 CCL5P13501 91 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF24P17028 368 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SNAP47Q5SQN1 464 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 C6orf141Q5SZD1 244 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 GLYATL1Q969I3 302 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 OTUB2Q96DC9 234 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 HCN4Q9Y3Q4 1203 aa14.3□□□□□ -0.12
PTPRU-205ENST00000460170 SORBS2O94875 1100 aaKnown RBP14.29□□□□□ -0.12
PTPRU-205ENST00000460170 GSRP00390 522 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TUBA1BP68363 451 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 PTGES3Q15185 160 aaKnown RBP14.29□□□□□ -0.12
PTPRU-205ENST00000460170 RAB41Q5JT25 222 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TUBA1AQ71U36 451 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 HSPBAP1Q96EW2 488 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 C11orf49Q9H6J7 331 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
PTPRU-205ENST00000460170 KDELR2P33947 212 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 RHAGQ02094 409 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 FPGSQ05932 587 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TOMM20Q15388 145 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 POMZP3Q6PJE2 187 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TRIM74Q86UV6 250 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 RNF130Q86XS8 419 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 GPR150Q8NGU9 434 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TP53INP1Q96A56 240 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 ZSCAN32Q9NX65 697 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 XKRYO14609 159 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 NDUFS4O43181 175 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 CAPN3P20807 821 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TPTEP56180 551 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 MINDY4Q4G0A6 757 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 REEP3Q6NUK4 255 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 DIABLOQ9NR28 239 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TMEM98Q9Y2Y6 226 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 PCDHGA4Q9Y5G9 962 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 WASH4PA8MWX3 477 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 PRAMEF12O95522 483 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 SLC10A3P09131 477 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 FSHRP23945 695 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 ERVPABLB-1P60509 514 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 NDUFA5Q16718 116 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 RNASE12Q5GAN4 147 aaKnown RBP14.29□□□□□ -0.12
PTPRU-205ENST00000460170 CLEC12AQ5QGZ9 265 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 ENPP7Q6UWV6 458 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 IQCHQ86VS3 1027 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 C7orf61Q8IZ16 206 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 TREX1Q9NSU2 369 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 SMOXQ9NWM0 555 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 COMMD9Q9P000 198 aa14.29□□□□□ -0.12
PTPRU-205ENST00000460170 SOCS2O14508 198 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 HLA-EP13747 358 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF182P17025 639 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 AKT2P31751 481 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 CBX3Q13185 183 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 GPM6BQ13491 265 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 RAB39AQ14964 217 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 MYRFLQ96LU7 910 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 SPHK2Q9NRA0 654 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 COMMD3Q9UBI1 195 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 DAPL1A0PJW8 107 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 KMOO15229 486 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 AGR2O95994 175 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 BMP2P12643 396 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 HSD3B1P14060 373 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 JUPP14923 745 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ALAS2P22557 587 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 HSD3B2P26439 372 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 HTR6P50406 440 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 SLC13A2Q13183 592 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 TLR9Q9NR96 1032 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 PRKAB1Q9Y478 270 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF8P17098 575 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ENTPD1P49961 510 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 DGKEP52429 567 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 SMSP52788 366 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 TMBIM6P55061 237 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 CLDN8P56748 225 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 KCNC4Q03721 635 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 KIAA1161Q6NSJ0 714 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 PAQR9Q6ZVX9 377 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ZNF534Q76KX8 674 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 CMTR2Q8IYT2 770 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 NRG4Q8WWG1 115 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 MYH9P35579 1960 aaKnown RBP14.28□□□□□ -0.12
PTPRU-205ENST00000460170 XPNPEP2O43895 674 aa14.28□□□□□ -0.12
PTPRU-205ENST00000460170 ECDO95905 644 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms