RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
HERC4-207ENST00000460168 COL6A3P12111 3177 aa10.04□□□□□ -0.8
HERC4-207ENST00000460168 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC5A10A0PJK1 596 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 H3BM21 787 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GFYI3L273 518 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC16A5O15375 505 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC31A1O15431 190 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TAPBPO15533 448 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 DCXO43602 365 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 LILRB5O75023 590 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 POP7O75817 140 aaKnown RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 SULT1C4O75897 302 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GLAP06280 429 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 FGF4P08620 206 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC5A2P31639 672 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 RASSF2P50749 326 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ARFIP1P53367 373 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 FOXA1P55317 472 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 OCA2Q04671 838 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC34A1Q06495 639 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GTF2H2Q13888 395 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TBCCQ15814 346 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 CCDC6Q16204 474 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 Q6ZS52 159 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GOLGA7Q7Z5G4 137 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ZNF547Q8IVP9 402 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PGBD3Q8N328 593 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 DCBLD1Q8N8Z6 715 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TP53I13Q8NBR0 393 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 OR52B6Q8NGF0 335 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 NRG4Q8WWG1 115 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 FOXJ1Q92949 421 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 C19orf60Q96EN9 201 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ZNF486Q96H40 463 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 MYOCQ99972 504 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TUBB6Q9BUF5 446 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GON7Q9BXV9 100 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 CD244Q9BZW8 370 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 NOL11Q9H8H0 719 aaKnown RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 MEAF6Q9HAF1 191 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PHPT1Q9NRX4 125 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 ARL8BQ9NVJ2 186 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GULP1Q9UBP9 304 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 HCN4Q9Y3Q4 1203 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 DNAJC15Q9Y5T4 150 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 KLF2Q9Y5W3 355 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 A6NL46 340 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PRR5-ARHGAP8B1AHC4 643 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PSMD9O00233 223 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ACOX3O15254 700 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 MATN4O95460 622 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 HSMCR30P0CW71 290 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 PDHA2P29803 388 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ATP6V1E1P36543 226 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 MAPK9P45984 424 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TPMTP51580 245 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 AP1S2P56377 157 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PPP2CBP62714 309 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PPP2CAP67775 309 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ARHGAP8P85298 464 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 CDKL1Q00532 357 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PLIN5Q00G26 463 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 LGALS3BPQ08380 585 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ERV3-1Q14264 604 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ZNF829Q3KNS6 432 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 CDKL4Q5MAI5 379 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 PRPF38BQ5VTL8 546 aaKnown RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 KANK2Q63ZY3 851 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 FAM91A1Q658Y4 838 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SYVN1Q86TM6 617 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 SLC22A15Q8IZD6 547 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TRIM63Q969Q1 353 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 NSL1Q96IY1 281 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 LINC00615Q96LM1 132 aaPredicted RBP10.03□□□□□ -0.8
HERC4-207ENST00000460168 CDK15Q96Q40 435 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TMEM79Q9BSE2 394 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 TEX101Q9BY14 249 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 IPPKQ9H8X2 491 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 FZD3Q9NPG1 666 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ERVK-19Q9WJR5 959 aa10.03□□□□□ -0.8
HERC4-207ENST00000460168 ATP6AP2A0A1C7CYW4 349 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 SDHDO14521 159 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 STK16O75716 305 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 ATP6AP2O75787 350 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 OTCP00480 354 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 CATP04040 527 aaKnown RBP10.02□□□□□ -0.81
HERC4-207ENST00000460168 T-ENOLP0DO92 83 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 EPB42P16452 691 aa10.02□□□□□ -0.81
HERC4-207ENST00000460168 GABRG2P18507 467 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms