RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MEAF6Q9HAF1 191 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 SFT2D3Q587I9 215 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 NKAPLQ5M9Q1 402 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 PNLDC1Q8NA58 520 aaKnown RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 ORAI3Q9BRQ5 295 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 SPATA7Q9P0W8 599 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 SEMA3AQ14563 771 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 OR5J2Q8NH18 312 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 METTL7AQ9H8H3 244 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 STOX2Q9P2F5 926 aaPredicted RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 ATRNO75882 1429 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 MANBAO00462 879 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 TTLL10Q6ZVT0 673 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 FBXL18Q96ME1 805 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 TTYH3Q9C0H2 523 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 MUSKO15146 869 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 TBX10O75333 385 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 GPX6P59796 221 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 CBLBQ13191 982 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 USF2Q15853 346 aaPredicted RBP19.08■□□□□ 0.65
SNX27-204ENST00000458013 BRF2Q9HAW0 419 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 DLX3O60479 287 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 DPYSL2Q16555 572 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 PYURFQ96I23 114 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 SLC32A1Q9H598 525 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 XKR8Q9H6D3 395 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 MS4A12Q9NXJ0 267 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 GRHPRQ9UBQ7 328 aa19.08■□□□□ 0.65
SNX27-204ENST00000458013 ZNF670-ZNF695F2Z2N8 137 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 RNF13O43567 381 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 PLATP00750 562 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 PTP4A2Q12974 167 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 KIAA0930Q6ICG6 404 aaPredicted RBP19.08■□□□□ 0.64
SNX27-204ENST00000458013 TDRPQ86YL5 185 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 MRIQ9BWK5 157 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 EIF2B3Q9NR50 452 aaKnown RBP19.08■□□□□ 0.64
SNX27-204ENST00000458013 A0A1B0GV50 99 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 GABRDO14764 452 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 NNATQ16517 81 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 CMTM8Q8IZV2 173 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 CNIH3Q8TBE1 160 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 ZNF431Q8TF32 576 aaPredicted RBP19.08■□□□□ 0.64
SNX27-204ENST00000458013 FUZQ9BT04 418 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 DKKL1Q9UK85 242 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 FBXO9Q9UK97 447 aaPredicted RBP19.08■□□□□ 0.64
SNX27-204ENST00000458013 SPEF1Q9Y4P9 236 aa19.08■□□□□ 0.64
SNX27-204ENST00000458013 TACSTD2P09758 323 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 SOX2P48431 317 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PPIGQ13427 754 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNX27-204ENST00000458013 MAD2L1BPQ15013 274 aaPredicted RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 RUNDC3AQ59EK9 446 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 BIRC7Q96CA5 298 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 OTUB2Q96DC9 234 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 CDKN2AIPNLQ96HQ2 116 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 CGREF1Q99674 301 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PRORSD1PA6NEY8 169 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 FOXD2O60548 495 aaPredicted RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 GNAO1P09471 354 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 CSNK2A2P19784 350 aaPredicted RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 FXYD6P3P58550 94 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 GRK1Q15835 563 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 LBX2Q6XYB7 198 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 VTCN1Q7Z7D3 282 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 MINDY3Q9H8M7 445 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 A0A0D9SEW6 157 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 HSD3B2P26439 372 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 APLP1P51693 650 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 GPM6BQ13491 265 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 ZMYND11Q15326 602 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PRRT3Q5FWE3 981 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 KRTCAP2Q8N6L1 136 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 OR4K1Q8NGD4 311 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 FANK1Q8TC84 345 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 GEMIN6Q8WXD5 167 aaKnown RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PCDHGB7Q9Y5F8 929 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 HNRNPA0Q13151 305 aaKnown RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 ADAM15Q13444 863 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 ZNF517Q6ZMY9 492 aaPredicted RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 ZNF227Q86WZ6 799 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 TMEM130Q8N3G9 435 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 POP5Q969H6 163 aaKnown RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 C12orf43Q96C57 262 aaKnown RBP19.07■□□□□ 0.64
SNX27-204ENST00000458013 ALPK1Q96QP1 1244 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 TIGARQ9NQ88 270 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PTTG2Q9NZH5 202 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 ABCG2Q9UNQ0 655 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PPLO60437 1756 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 IRAK2O43187 625 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 AOC2O75106 756 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 CD97P48960 835 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 CLRN1P58418 232 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 OGDHQ02218 1023 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 PHC2Q8IXK0 858 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 MFSD2AQ8NA29 543 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 OR4K17Q8NGC6 315 aa19.07■□□□□ 0.64
SNX27-204ENST00000458013 BTBD16Q32M84 506 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 ZDHHC4Q9NPG8 344 aa19.06■□□□□ 0.64
SNX27-204ENST00000458013 ZDHHC18Q9NUE0 388 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms