RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 HIST2H2ACQ16777 129 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-202ENST00000450991 SPIN4Q56A73 249 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 ACSM2BQ68CK6 577 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 HIST2H2AA3Q6FI13 130 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 RNF111Q6ZNA4 994 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 RAB42Q8N4Z0 105 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 BHLHE22Q8NFJ8 381 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-202ENST00000450991 SLC26A7Q8TE54 656 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 PYDC1Q8WXC3 89 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 GTF2H4Q92759 462 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 UBE2E3Q969T4 207 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 EGLN2Q96KS0 407 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 LRRC61Q9BV99 259 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 RHBGQ9H310 441 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 KIR3DX1Q9H7L2 352 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 TRNAU1APQ9NX07 287 aaKnown RBP7.93□□□□□ -1.14
NECAP1-202ENST00000450991 TAAR2Q9P1P5 351 aa7.93□□□□□ -1.14
NECAP1-202ENST00000450991 APOBEC3BQ9UH17 382 aaKnown RBP7.93□□□□□ -1.14
NECAP1-202ENST00000450991 TLR4O00206 839 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PRMT3O60678 531 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SDC3O75056 442 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 CTSEP14091 401 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SLC19A1P41440 591 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PTDSS1P48651 473 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 RACK1P63244 317 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 REEP5Q00765 189 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 CSTF1Q05048 431 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SF1Q15637 639 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 NANOGP8Q6NSW7 305 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 GALNT18Q6P9A2 607 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TMIGD1Q6UXZ0 262 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SLC36A4Q6YBV0 504 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 ZNF761Q86XN6 746 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 KRT78Q8N1N4 520 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 C1orf52Q8N6N3 182 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 MFSD2AQ8NA29 543 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 HIPK4Q8NE63 616 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 OR4E2Q8NGC2 313 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 OR2A1Q8NGT9 310 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 DNAJB14Q8TBM8 379 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 GIMAP1Q8WWP7 306 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 CXorf40BQ96DE9 158 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TRIM8Q9BZR9 551 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PCDHAC1Q9H158 963 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 NT5DC2Q9H857 520 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 NANOGQ9H9S0 305 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 STOML1Q9UBI4 398 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 BCAP29Q9UHQ4 241 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 ANGPTL2Q9UKU9 493 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 MAN2B2Q9Y2E5 1009 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TMEM131Q92545 1883 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SPEGQ15772 3267 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TRBV5-3A0A0A0MS03 114 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 C15orf38-AP3S2A0A0A6YYH1 394 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 IGKV1-8A0A0C4DH67 115 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 LAMTOR5O43504 91 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 KCNH1O95259 989 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 ANP32DO95626 131 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TBX6O95947 436 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 F3P13726 295 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 HOXB9P17482 250 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PRPS1L1P21108 318 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PEBP1P30086 187 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TIA1P31483 386 aaKnown RBP eCLIP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 CCR8P51685 355 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 EEFSECP57772 596 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PRDX1Q06830 199 aaKnown RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 MAPKAPK3Q16644 382 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 UGT8Q16880 541 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 RABL3Q5HYI8 236 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 ARPINQ7Z6K5 226 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SYT12Q8IV01 421 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 ANKRD53Q8N9V6 530 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 C1orf216Q8TAB5 229 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 GPBAR1Q8TDU6 330 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 POM121Q96HA1 1249 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 OR52E6Q96RD3 313 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 CGREF1Q99674 301 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 AIF1LQ9BQI0 150 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PITHD1Q9GZP4 211 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SERHLQ9NQF3 203 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 NMRK1Q9NWW6 199 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 SPHK1Q9NYA1 384 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 PCDHB11Q9Y5F2 797 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 COLEC10Q9Y6Z7 277 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 THADAQ6YHU6 1953 aa7.92□□□□□ -1.14
NECAP1-202ENST00000450991 TMEM221A6NGB7 291 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 B4DGG1 531 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 M0R296 226 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 MYO1DO94832 1006 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 KLHL18O94889 574 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 LRATO95237 230 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 TGFB1P01137 390 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 C8BP07358 591 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 CXCR2P25025 360 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 S100A3P33764 101 aa7.91□□□□□ -1.14
NECAP1-202ENST00000450991 DHPSP49366 369 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-202ENST00000450991 GSK3BP49841 420 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms