RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 TRIM55Q9BYV6 548 aa23.8■■□□□ 1.4
HTATSF1-203ENST00000448450 SPNS1Q9H2V7 528 aa23.8■■□□□ 1.4
HTATSF1-203ENST00000448450 SOX17Q9H6I2 414 aaPredicted RBP23.8■■□□□ 1.4
HTATSF1-203ENST00000448450 MRPS2Q9Y399 296 aaKnown RBP23.8■■□□□ 1.4
HTATSF1-203ENST00000448450 IKBKGQ9Y6K9 419 aa23.8■■□□□ 1.4
HTATSF1-203ENST00000448450 MED13Q9UHV7 2174 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 A0A087WUV0 522 aaPredicted RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 A0A0A6YYC8 382 aaPredicted RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 I3L1I5 382 aaPredicted RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 FFAR3O14843 346 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 GPR42O15529 346 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 ALBP02768 609 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 PDGFAP04085 211 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 FBLP22087 321 aaKnown RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 TYK2P29597 1187 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 MSH2P43246 934 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 SNRPNP63162 240 aaKnown RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 ATP1A4Q13733 1029 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 FHL5Q5TD97 284 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 GARNL3Q5VVW2 1013 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 NXPE4Q6UWF7 544 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 TMPRSS11BQ86T26 416 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 ASPGQ86U10 573 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 ISCA2Q86U28 154 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 GSPT2Q8IYD1 628 aaKnown RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 PRSS58Q8IYP2 241 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 MFSD9Q8NBP5 474 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 SLC13A3Q8WWT9 602 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 MMABQ96EY8 250 aaPredicted RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 PLEKHB1Q9UF11 243 aaPredicted RBP23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 CDC14AQ9UNH5 594 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 KCNE2Q9Y6J6 123 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 SCN3AQ9NY46 2000 aa23.79■■□□□ 1.4
HTATSF1-203ENST00000448450 A0A087X1B8 175 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 A0A096LPK6 155 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 S100BP04271 92 aaPredicted RBP23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 SERPIND1P05546 499 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 UMODP07911 640 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 SLC6A12P48065 614 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 HSPA7P48741 367 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 PGDP52209 483 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 NDUFA9Q16795 377 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 SULT1C3Q6IMI6 304 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 TCAIMQ8N3R3 496 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 ARHGEF39Q8N4T4 335 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 CAMKVQ8NCB2 501 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 STAG3L4Q8TBR4 150 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 CPT1CQ8TCG5 803 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 TM4SF19Q96DZ7 209 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 TMEM79Q9BSE2 394 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 DRC3Q9H069 523 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 ING2Q9H160 280 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 VPS11Q9H270 941 aa23.78■■□□□ 1.4
HTATSF1-203ENST00000448450 TRBC2A0A5B9 178 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 FOXS1O43638 330 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 ALDOAP04075 364 aaKnown RBP23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 GNLYP22749 145 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 VARSP26640 1264 aaKnown RBP23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 GLRBP48167 497 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 SERPINB8P50452 374 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 CCL11P51671 97 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 OCA2Q04671 838 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 CENPLQ8N0S6 344 aaPredicted RBP23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 TBC1D19Q8N5T2 526 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 KCT2Q8NC54 265 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 ZCCHC10Q8TBK6 192 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 SPSB2Q99619 263 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 SLC26A1Q9H2B4 701 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 WDR54Q9H977 334 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 PELI2Q9HAT8 420 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 ACSS2Q9NR19 701 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 TRPC4Q9UBN4 977 aa23.77■■□□□ 1.4
HTATSF1-203ENST00000448450 SUPT3HB4E1H0 165 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 UBXN8O00124 270 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 SUPT3HO75486 399 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 SLC26A3P40879 764 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 SERPINB9P50453 376 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 RBBP5Q15291 538 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 VWA2Q5GFL6 755 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 TRMT10CQ7L0Y3 403 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 MRGPREQ86SM8 312 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 KLHDC8AQ8IYD2 350 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 SNX31Q8N9S9 440 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 OR9A4Q8NGU2 314 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 STT3BQ8TCJ2 826 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 DCAKDQ8WVC6 231 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 MOCOSQ96EN8 888 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 MVB12AQ96EY5 273 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 AIF1LQ9BQI0 150 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 SLC25A23Q9BV35 468 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 CNOT10Q9H9A5 744 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 DNAJC11Q9NVH1 559 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 ZNF282Q9UDV7 671 aaPredicted RBP23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 PTBP2Q9UKA9 531 aaKnown RBP23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 PCSK5Q92824 1860 aa23.76■■□□□ 1.39
HTATSF1-203ENST00000448450 ITPR2Q14571 2701 aa23.75■■□□□ 1.39
HTATSF1-203ENST00000448450 EXOC1LA0A1B0GW35 172 aa23.75■■□□□ 1.39
HTATSF1-203ENST00000448450 VSTM2BA6NLU5 285 aa23.75■■□□□ 1.39
HTATSF1-203ENST00000448450 RIPK2O43353 540 aa23.75■■□□□ 1.39
HTATSF1-203ENST00000448450 H2AFYO75367 372 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms