RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PTRH2Q9Y3E5 179 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 ANGPTL3Q9Y5C1 460 aa16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 TNPO3Q9Y5L0 923 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-209ENST00000444508 LOC400499M0QZD8 3231 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 A0A0A6YYC8 382 aaPredicted RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 SMIM23A6NLE4 172 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 I3L1I5 382 aaPredicted RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 KLK8O60259 260 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 SMIM24O75264 130 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TUBBP07437 444 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 EPB42P16452 691 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLCO1A2P46721 670 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 IRF8Q02556 426 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 OCA2Q04671 838 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 RGS1Q08116 209 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 IL10RAQ13651 578 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLBPQ14493 270 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TBR1Q16650 682 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TMEM214Q6NUQ4 689 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 LCA5Q86VQ0 697 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TDRPQ86YL5 185 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 RAB43Q86YS6 212 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 DTWD1Q8N5C7 304 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TRPV3Q8NET8 790 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 OR2Y1Q8NGV0 311 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZCCHC10Q8TBK6 192 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 ACMSDQ8TDX5 336 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 THAP4Q8WY91 577 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 TTC9Q92623 222 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 EXTL1Q92935 676 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 CAVIN3Q969G5 261 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 PTCD3Q96EY7 689 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 EFCAB11Q9BUY7 163 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 PITHD1Q9GZP4 211 aaPredicted RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 MRPL46Q9H2W6 279 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 WDR54Q9H977 334 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 ASB1Q9Y576 335 aa16.6■□□□□ 0.25
SMARCAL1-209ENST00000444508 KLF7O75840 302 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 KRT15P19012 456 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 CCR10P46092 362 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 LAPTM5Q13571 262 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 DSG2Q14126 1118 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 HIST2H2ACQ16777 129 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 PAGE2BQ5JRK9 111 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 FAM69BQ5VUD6 431 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 HIST2H2AA3Q6FI13 130 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 TMIGD1Q6UXZ0 262 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 COX15Q7KZN9 410 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 ARHGEF39Q8N4T4 335 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 PTGR2Q8N8N7 351 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 KCT2Q8NC54 265 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 TTLQ8NG68 377 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 NT5CQ8TCD5 201 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 EPS8L3Q8TE67 593 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 YIPF2Q9BWQ6 316 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLC26A1Q9H2B4 701 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 ANKHQ9HCJ1 492 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 CTSFQ9UBX1 484 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 ZNF282Q9UDV7 671 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 MAN2B2Q9Y2E5 1009 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 CACNA1GO43497 2377 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 PIEZO2Q9H5I5 2752 aa16.59■□□□□ 0.25
SMARCAL1-209ENST00000444508 URADA6NGE7 173 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 GOLGA8RI6L899 631 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 FOXS1O43638 330 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 CNOT3O75175 753 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 CDH16O75309 829 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 FURINP09958 794 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 NUDT17P0C025 328 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 PYGBP11216 843 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 GSTM2P28161 218 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 OTX2P32243 289 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 PIK3CGP48736 1102 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 SKP1P63208 163 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 IFFO1Q0D2I5 559 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 CHIT1Q13231 466 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 DOC2AQ14183 400 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 SSPNQ14714 243 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 NAA30Q147X3 362 aaPredicted RBP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 HERC3Q15034 1050 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 RASA2Q15283 850 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 PCBP2Q15366 365 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 TBCCQ15814 346 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 NKG7Q16617 165 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 METTL2BQ6P1Q9 378 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 TEX9Q8N6V9 391 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 ANKRD53Q8N9V6 530 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 OR9A4Q8NGU2 314 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 MZB1Q8WU39 189 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 APOBEC4Q8WW27 367 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 WDR34Q96EX3 536 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 WBP1Q96G27 269 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 SEC16BQ96JE7 1060 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 NT5DC2Q9H857 520 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 PRM3Q9NNZ6 103 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 TRPC4Q9UBN4 977 aa16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 RALYQ9UKM9 306 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-209ENST00000444508 SLC22A7Q9Y694 548 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms