RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NARFQ9UHQ1 456 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ATP6V1HQ9UI12 483 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 NAP1L2Q9ULW6 460 aaPredicted RBP4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 ABCC4O15439 1325 aa4.88□□□□□ -1.63
TM9SF3-202ENST00000443638 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 LINC01548A6NM66 108 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 M0R296 226 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 ARPC2O15144 300 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 H1F0P07305 194 aaKnown RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SFTPBP07988 381 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SERPINF2P08697 491 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 GM2AP17900 193 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 CBLP22681 906 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 ITGA3P26006 1051 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC1A3P43003 542 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 MYBPHQ13203 477 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 DMP1Q13316 513 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 FOXE3Q13461 319 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 RFTN1Q14699 578 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 KRT31Q15323 416 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 IMMTQ16891 758 aaKnown RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 PHLDA2Q53GA4 152 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 XKR9Q5GH70 373 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 IL23RQ5VWK5 629 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 OR4A47Q6IF82 309 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 FUT10Q6P4F1 479 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 ZNF704Q6ZNC4 412 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 LRRC70Q7Z2Q7 622 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 OR11H4Q8NGC9 324 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 UBTD2Q8WUN7 234 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 GLYATL1Q969I3 302 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 PHF21AQ96BD5 680 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 GIMAP5Q96F15 307 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 URB1-AS1Q96HZ7 61 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 MAGED4Q96JG8 741 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SGK494Q96LW2 274 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 CCT7Q99832 543 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 CCDC77Q9BR77 488 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 CBWD1Q9BRT8 395 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 ALKBH7Q9BT30 221 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 NUSAP1Q9BXS6 441 aaKnown RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 GCOM2Q9BZD3 368 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SDCBP2Q9H190 292 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 LRMDAQ9H2I8 198 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 VCX2Q9H322 139 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 TLE6Q9H808 572 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 WDR76Q9H967 626 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 PARD6AQ9NPB6 346 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 GLRX2Q9NS18 164 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SPHK1Q9NYA1 384 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 AIPL1Q9NZN9 384 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 VPS54Q9P1Q0 977 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 COPS7AQ9UBW8 275 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 DAPK2Q9UIK4 370 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 PCDHA7Q9UN72 937 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 SPACA6W5XKT8 324 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 PTCH1Q13635 1447 aa4.87□□□□□ -1.63
TM9SF3-202ENST00000443638 C2CD4DB7Z1M9 353 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 E9PI62 339 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CCL24O00175 119 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 PDXKO00764 312 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 BCAR3O75815 825 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 KDM4BO94953 1096 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 LIPFP07098 398 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 PROS1P07225 676 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ASGR1P07306 291 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 RRASP10301 218 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CETPP11597 493 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 F3P13726 295 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 RPA2P15927 270 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CALB2P22676 271 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 PRDX2P32119 198 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC6A8P48029 635 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 NUMBP49757 651 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 PDE1BQ01064 536 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ID2Q02363 134 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 KLC1Q07866 573 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 DMPKQ09013 629 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TMED1Q13445 227 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ZMYND11Q15326 602 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CARTPTQ16568 116 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 KCTD21Q4G0X4 260 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM119Q4V9L6 283 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CAVIN4Q5BKX8 364 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ARMCX4Q5H9R4 360 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 WASHC2DQ5SRD0 308 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 RAD9BQ6WBX8 426 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 TAS2R42Q7RTR8 314 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 PRUNE1Q86TP1 453 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 ZDHHC17Q8IUH5 632 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CROCCP3Q8IVE0 287 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 CRYBG2Q8N1P7 616 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 LRRC17Q8N6Y2 441 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 SMYD1Q8NB12 490 aa4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 NOA1Q8NC60 698 aaKnown RBP4.86□□□□□ -1.63
TM9SF3-202ENST00000443638 SEMA6DQ8NFY4 1073 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms