RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 FBXO15Q8NCQ5 510 aaPredicted RBP13.52□□□□□ -0.25
HMGN1-208ENST00000443046 LPGAT1Q92604 370 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 TM4SF19Q96DZ7 209 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 LPAR4Q99677 370 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 EBNA1BP2Q99848 306 aaKnown RBP13.52□□□□□ -0.25
HMGN1-208ENST00000443046 ZNF559Q9BR84 538 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 LANCL2Q9NS86 450 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 HCN3Q9P1Z3 774 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 GALPQ9UBC7 116 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
HMGN1-208ENST00000443046 TCRBV7S2A1N4TA0A589 114 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 MAGEB17A8MXT2 336 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 H7BY64 318 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 SGK494L7N484 410 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 KIF5CO60282 957 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 NDUFS3O75489 264 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 TPOP07202 933 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 ARNTP27540 789 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
HMGN1-208ENST00000443046 FDFT1P37268 417 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 ADARP55265 1226 aaKnown RBP13.51□□□□□ -0.25
HMGN1-208ENST00000443046 EIF3BP55884 814 aaKnown RBP13.51□□□□□ -0.25
HMGN1-208ENST00000443046 MPP1Q00013 466 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 NSDHLQ15738 373 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 CMPK2Q5EBM0 449 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 EMC4Q5J8M3 183 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 PCID2Q5JVF3 399 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 TMEM200AQ86VY9 491 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 CCDC170Q8IYT3 715 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 TC2NQ8N9U0 490 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 PPFIBP2Q8ND30 876 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 CHDHQ8NE62 594 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-208ENST00000443046 C16orf52Q8NHV5 167 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 MCOLN3Q8TDD5 553 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 PRAP1Q96NZ9 151 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 MACROD1Q9BQ69 325 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 KCNJ16Q9NPI9 418 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
HMGN1-208ENST00000443046 RPH3AQ9Y2J0 694 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-208ENST00000443046 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 NDC80O14777 642 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 NIPSNAP2O75323 286 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 STATHP02808 62 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 IL1RNP18510 177 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TFEBP19484 476 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 IL10P22301 178 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 CYB561P49447 251 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 HLCSP50747 726 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 MLF1P58340 268 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TAS2R50P59544 299 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 KCNJ11Q14654 390 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 OASLQ15646 514 aaKnown RBP13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TYSND1Q2T9J0 566 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 KLHL38Q2WGJ6 581 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 RPRMLQ8N4K4 120 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 KIF2BQ8N4N8 673 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
HMGN1-208ENST00000443046 RND1Q92730 232 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TSLPQ969D9 159 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 CCDC138Q96M89 665 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TP63Q9H3D4 680 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-208ENST00000443046 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-208ENST00000443046 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 CCM2LQ9NUG4 571 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-208ENST00000443046 TMEM184CQ9NVA4 438 aa13.5□□□□□ -0.25
HMGN1-208ENST00000443046 FAM90A27PA6NNH2 459 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 H3BMM5 538 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 SMAPO00193 183 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 KLK8O60259 260 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 ESR1P03372 595 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 CATP04040 527 aaKnown RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 FOSL1P15407 271 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 HRH2P25021 359 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 FMO4P31512 558 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 RPS15AP62244 130 aaKnown RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 FOLH1Q04609 750 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 TSTA3Q13630 321 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 CCDC71Q8IV32 467 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 SULF2Q8IWU5 870 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 ZFP62Q8NB50 900 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 THAP11Q96EK4 314 aa13.49□□□□□ -0.25
HMGN1-208ENST00000443046 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
HMGN1-208ENST00000443046 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 GRID2IPA4D2P6 1211 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 GFYI3L273 518 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-208ENST00000443046 RDH16O75452 317 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 CTAG2O75638 210 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 NMBRP28336 390 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 SKIV2L2P42285 1042 aaKnown RBP13.48□□□□□ -0.25
HMGN1-208ENST00000443046 MEOX1P50221 254 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 CLCN7P51798 805 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ITGA8P53708 1063 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms