RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 NXT1Q9UKK6 140 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 POLHQ9Y253 713 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC22A7Q9Y694 548 aa14.31□□□□□ -0.12
CSNK1E-210ENST00000442216 IGLV3-12A0A075B6K2 115 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 URADA6NGE7 173 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 H0YIG0 161 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 STX16-NPEPL1H3BU86 382 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 STX16O14662 325 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 NSA2O95478 260 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 EPB42P16452 691 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 AVPR1BP47901 424 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 PIK3CGP48736 1102 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 AGTR2P50052 363 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 RPS18P62269 152 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 RGS1Q08116 209 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 ERV3-1Q14264 604 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 SSPNQ14714 243 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 FBXO48Q5FWF7 155 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 PAGE2BQ5JRK9 111 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 C16orf46Q6P387 395 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 TMIGD1Q6UXZ0 262 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 COX15Q7KZN9 410 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 RIBC1Q8N443 379 aaPredicted RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 SNX31Q8N9S9 440 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 ZNF740Q8NDX6 193 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 OR2Y1Q8NGV0 311 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 ADAMTS17Q8TE56 1095 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 NACC2Q96BF6 587 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 SCYL1Q96KG9 808 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 IP6K3Q96PC2 410 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 CPSF2Q9P2I0 782 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 DCDC2Q9UHG0 476 aa14.3□□□□□ -0.12
CSNK1E-210ENST00000442216 VSTM2BA6NLU5 285 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 NDUFS4O43181 175 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 FOXS1O43638 330 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 UGDHO60701 494 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 SMIM24O75264 130 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 WFS1O76024 890 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 SERPINA6P08185 405 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 PRKAR1AP10644 381 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 EPORP19235 508 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 VARSP26640 1264 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 HPDP32754 393 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 FOLR3P41439 243 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 OR1D4P47884 311 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 SKP1P63208 163 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 CYP4F2P78329 520 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 IRF8Q02556 426 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 OCA2Q04671 838 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 DSG2Q14126 1118 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 SLBPQ14493 270 aaKnown RBP eCLIP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 RBBP5Q15291 538 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 NKG7Q16617 165 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 HIST2H2ACQ16777 129 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 XKR6Q5GH73 641 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 HIST2H2AA3Q6FI13 130 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 BORAQ6PGQ7 559 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 RAB43Q86YS6 212 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 TMEM151AQ8N4L1 468 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 ANKRD53Q8N9V6 530 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 UBE2E3Q969T4 207 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 COL26A1Q96A83 441 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 ZNF282Q9UDV7 671 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 MAP4K5Q9Y4K4 846 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 ASB1Q9Y576 335 aa14.29□□□□□ -0.12
CSNK1E-210ENST00000442216 CDC14CA4D256 554 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TK2O00142 265 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 PRAMEF4O60810 478 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 CNOT3O75175 753 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 IGHEP01854 428 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 PYGBP11216 843 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 KRT15P19012 456 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TAC1P20366 129 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 FBLP22087 321 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 NFKB2Q00653 900 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 CHIT1Q13231 466 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 IL10RAQ13651 578 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 DOC2AQ14183 400 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC9A5Q14940 896 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 HERC3Q15034 1050 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TBR1Q16650 682 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 PRAMEF9Q5VWM5 478 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 AFAP1L2Q8N4X5 818 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TEX9Q8N6V9 391 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 PTGR2Q8N8N7 351 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 KCT2Q8NC54 265 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 EPS8L3Q8TE67 593 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 MMABQ96EY8 250 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 SPSB2Q99619 263 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TGIF2Q9GZN2 237 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 SLC6A16Q9GZN6 736 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 RHBGQ9H310 441 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 CLK4Q9HAZ1 481 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 ANKHQ9HCJ1 492 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 MKKSQ9NPJ1 570 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms