RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ENTPD4Q9Y227 616 aa5.68□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PUS1Q9Y606 427 aaKnown RBP eCLIP5.68□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PFASO15067 1338 aa5.68□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CHD4Q14839 1912 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MYH14Q7Z406 1995 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 TEX13CA0A0J9YWL9 993 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MEX3AA1L020 520 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 LRRC53A6NM62 1247 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CENPBD1B2RD01 187 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 KCNJ18B7U540 433 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 H0YGN5 161 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 H7C1Q1 480 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NR5A2O00482 541 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 AIM2O14862 343 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MATN3O15232 486 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CHMP2AO43633 222 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ASS1P00966 412 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ITGA2P17301 1181 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 DRD1P21728 446 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 RORAP35398 523 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SLC26A3P40879 764 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 EIF2B2P49770 351 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ITGA1P56199 1179 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 FAM3BP58499 235 aaPredicted RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NLRP11P59045 1033 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 GALK2Q01415 458 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MAB21L1Q13394 359 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 TOP3AQ13472 1001 aaPredicted RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CCNIQ14094 377 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PIGHQ14442 188 aaPredicted RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 KCNJ12Q14500 433 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 EZH2Q15910 746 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PDK4Q16654 411 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MOGAT2Q3SYC2 334 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 XKR4Q5GH76 650 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CERCAMQ5T4B2 595 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 DENND2CQ68D51 928 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SPOPLQ6IQ16 392 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MAMDC4Q6UXC1 1216 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 IL20RBQ6UXL0 311 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 LRRC74BQ6ZQY2 392 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 C15orf39Q6ZRI6 1047 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 FAM122BQ7Z309 247 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 RTN4RL2Q86UN3 420 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ITIH5Q86UX2 942 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 OR10T2Q8NGX3 314 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 GIPC3Q8TF64 312 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SLC25A36Q96CQ1 311 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 DNAJC1Q96KC8 554 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ZNF184Q99676 751 aaPredicted RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CALN1Q9BXU9 219 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NAPBQ9H115 298 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SNX25Q9H3E2 840 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CXorf36Q9H7Y0 433 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 WNT16Q9UBV4 365 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ZNF229Q9UJW7 825 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 GUCA1BQ9UMX6 200 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 LRP5O75197 1615 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PHLPP1O60346 1717 aa5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 DDX60Q8IY21 1712 aaKnown RBP5.67□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 A0A0A6YYC8 382 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 OR2A25A4D2G3 310 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 OR52A4PA6NMU1 304 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ANXA2P2A6NMY6 339 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 A8MXQ7 604 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 I3L1I5 382 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SNX3O60493 162 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 RPP14O95059 124 aaKnown RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 AHSA1O95433 338 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CRYZL1O95825 349 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 KRT6AP02538 564 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 C1SP09871 688 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ZNF12P17014 697 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 HOXA9P31269 272 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 HMGCLP35914 325 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 FRKP42685 505 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 GATA4P43694 442 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CDC34P49427 236 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 METAP2P50579 478 aaKnown RBP eCLIP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 RAB28P51157 221 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NDUFA8P51970 172 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 ZNF134P52741 427 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NAA20P61599 178 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 SP2Q02086 613 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PIGFQ07326 219 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 UAP1Q16222 522 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CDKL4Q5MAI5 379 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 UBAP2Q5T6F2 1119 aaKnown RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 NIPAL1Q6NVV3 410 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 FBXO46Q6PJ61 603 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 DHRS4L2Q6PKH6 230 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 COLCA1Q6ZS62 124 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 RFPL4BQ6ZWI9 263 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 BHLHA15Q7RTS1 189 aaPredicted RBP5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PAGE2Q7Z2X7 111 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 TBC1D10CQ8IV04 446 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 CMTM4Q8IZR5 234 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 PSD4Q8NDX1 1056 aa5.66□□□□□ -1.5
ALMS1-IT1-201ENST00000441587 MYLIPQ8WY64 445 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms