RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CYTIPO60759 359 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF883P0CG24 379 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 SP9P0CG40 484 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 PRKACGP22612 351 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 LUMP51884 338 aaPredicted RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 HUNKP57058 714 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 OR1D5P58170 312 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 FOLH1Q04609 750 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 TRA2AQ13595 282 aaKnown RBP eCLIP4.19□□□□□ -1.743e-6■■■■□ 22.5
PFDN4-202ENST00000441080 MTF1Q14872 753 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 FCN2Q15485 313 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 CHMP1BQ7LBR1 199 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 CATSPERDQ86XM0 798 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 MEX3DQ86XN8 651 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 CREBRFQ8IUR6 639 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 ATAD1Q8NBU5 361 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 UXS1Q8NBZ7 420 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NSMCE3Q96MG7 304 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF300Q96RE9 604 aaPredicted RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 PARK7Q99497 189 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 C10orf88Q9H8K7 445 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 RPF1Q9H9Y2 349 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 EXOC1Q9NV70 894 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NOCTQ9UK39 431 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 FBXL4Q9UKA2 621 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 CDH7Q9ULB5 785 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 PA2G4Q9UQ80 394 aaKnown RBP4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NSG2Q9Y328 171 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NPHP3Q7Z494 1330 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 OOEPA6NGQ2 149 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 A8MVM7 634 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 KBTBD13C9JR72 458 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 H0Y626 953 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 SAP30O75446 220 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 CGAP01215 116 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 KCNJ1P48048 391 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 NPBWR1P48145 328 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF542PQ5EBM4 170 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 CES4AQ5XG92 561 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 TRIM65Q6PJ69 517 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 ANKRD23Q86SG2 305 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 OR4D10Q8NGI6 311 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 AFAP1L1Q8TED9 768 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 SGF29Q96ES7 293 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 JAKMIP1Q96N16 626 aaKnown RBP4.18□□□□□ -1.74
PFDN4-202ENST00000441080 TSSK2Q96PF2 358 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 NEDD4LQ96PU5 975 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 TRIM51Q9BSJ1 452 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 FGFBP2Q9BYJ0 223 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 WWTR1Q9GZV5 400 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 HOXD1Q9GZZ0 328 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 LSG1Q9H089 658 aaKnown RBP4.18□□□□□ -1.74
PFDN4-202ENST00000441080 UBQLN3Q9H347 655 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 MED20Q9H944 212 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 PDRG1Q9NUG6 133 aa4.18□□□□□ -1.74
PFDN4-202ENST00000441080 IGKV3D-15A0A087WSY6 115 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 A0A0B4J203 849 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 SURF4O15260 269 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 STX6O43752 255 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 SERPINB2P05120 415 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 ZSCAN5DPP0CG00 497 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 TRIM49P0CI25 452 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 TRIM49CP0CI26 452 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 DLATP10515 647 aaKnown RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 EEF2P13639 858 aaKnown RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 DPEP1P16444 411 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 PIK3R1P27986 724 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 CCND3P30281 292 aaPredicted RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 KRT2P35908 639 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 IRX4P78413 519 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 DUSP5Q16690 384 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 ATP1A1-AS1Q5TC04 95 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 DHRS11Q6UWP2 260 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 KIF6Q6ZMV9 814 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 ZER1Q7Z7L7 766 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 HOOK3Q86VS8 718 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 NXPE2Q96DL1 559 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF599Q96NL3 588 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 SYT11Q9BT88 431 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 NACAP1Q9BZK3 213 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 UPF3AQ9H1J1 476 aaKnown RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 TEX10Q9NXF1 929 aaPredicted RBP4.17□□□□□ -1.74
PFDN4-202ENST00000441080 VPS18Q9P253 973 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 POLKQ9UBT6 870 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 LNPEPQ9UIQ6 1025 aa4.17□□□□□ -1.74
PFDN4-202ENST00000441080 A0A087WZ39 114 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 ILVBLA1L0T0 632 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 KPNA7A9QM74 516 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 RTCAO00442 366 aaKnown RBP4.16□□□□□ -1.74
PFDN4-202ENST00000441080 PGRMC2O15173 223 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 CTDSPLO15194 276 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 KIF5CO60282 957 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 CEACAM4O75871 244 aa4.16□□□□□ -1.74
PFDN4-202ENST00000441080 TNNT3P45378 269 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms