RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CCDC25Q86WR0 208 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 KCT2Q8NC54 265 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 DNAJB14Q8TBM8 379 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 RAB17Q9H0T7 212 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 MOCS1Q9NZB8 636 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 CTNNAL1Q9UBT7 734 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 C19orf25Q9UFG5 118 aaPredicted RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 NOVA2Q9UNW9 492 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SPTAN1Q13813 2472 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SCN2AQ99250 2005 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 CDC7O00311 574 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 TP73O15350 636 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 EIF3HO15372 352 aaKnown RBP eCLIP18.8■□□□□ 0.62e-6■■■□□ 15.9
SHROOM1-204ENST00000440118 WFS1O76024 890 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 SSTR1P30872 391 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 ARG2P78540 354 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 RGS1Q08116 209 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 Q0VFX4 171 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 CDC16Q13042 620 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 CRB2Q5IJ48 1285 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 Q6ZS92 163 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 TMPRSS11BQ86T26 416 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 CUZD1Q86UP6 607 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 ARHGEF39Q8N4T4 335 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 ABHD11Q8NFV4 315 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 OR51Q1Q8NH59 317 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 SNRNP40Q96DI7 357 aaKnown RBP18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 TSPAN17Q96FV3 270 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 PDLIM5Q96HC4 596 aaKnown RBP18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 ASF1BQ9NVP2 202 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 PTGFRNQ9P2B2 879 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 COPG1Q9Y678 874 aaKnown RBP18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 NAV2Q8IVL1 2488 aa18.8■□□□□ 0.6
SHROOM1-204ENST00000440118 IGHV1-45A0A0A0MS14 117 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 TRBC2A0A5B9 178 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 DYTNA2CJ06 578 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 ZNF860A6NHJ4 632 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 TCP11X1B4DZS4 312 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 RDH16O75452 317 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 PIAS1O75925 651 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 KLHL18O94889 574 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 BMP10O95393 424 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 SERPINA7P05543 415 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 PRR35P0CG20 571 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 ETF1P62495 437 aaKnown RBP18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 MFAP5Q13361 173 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 ZNF169Q14929 603 aaPredicted RBP18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 HERC3Q15034 1050 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 TLR1Q15399 786 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 NR6A1Q15406 480 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 CATSPEREQ5SY80 951 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 TMEM207Q6UWW9 146 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 THOC6Q86W42 341 aaKnown RBP18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 CTAGE3PQ8IX95 158 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 SIRT6Q8N6T7 355 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 BRIX1Q8TDN6 353 aaKnown RBP18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 NEIL2Q969S2 332 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 C19orf60Q96EN9 201 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 OR4K3Q96R72 315 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 AIF1LQ9BQI0 150 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 RBCK1Q9BYM8 510 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 POPDC3Q9HBV1 291 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 AGPAT4Q9NRZ5 378 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 IKZF3Q9UKT9 509 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 NAALAD2Q9Y3Q0 740 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 PCDHGA10Q9Y5H3 936 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 CSAG2Q9Y5P2 127 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 KCNE2Q9Y6J6 123 aa18.79■□□□□ 0.6
SHROOM1-204ENST00000440118 CPAMD8Q8IZJ3 1885 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 LCMT2O60294 686 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 JRKO75564 520 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 HNMTP50135 292 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 PLTPP55058 493 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 POU4F1Q01851 419 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 CAV1Q03135 178 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 CKAP4Q07065 602 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 MRPL49Q13405 166 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 USP10Q14694 798 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 TSNQ15631 228 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 PPP1R3AQ16821 1122 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 PRR7Q8TB68 274 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 TM4SF19Q96DZ7 209 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 UNKQ9C0B0 810 aaKnown RBP18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 VN1R1Q9GZP7 353 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 PRM3Q9NNZ6 103 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 OARD1Q9Y530 152 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 SVILO95425 2214 aa18.78■□□□□ 0.6
SHROOM1-204ENST00000440118 TCRBV9S1A1TA0A576 114 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 NCF1BA6NI72 391 aaPredicted RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 NCF1CA8MVU1 366 aaPredicted RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 CDC123O75794 336 aaPredicted RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 WDR47O94967 919 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 ICAM2P13598 275 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 NCF1P14598 390 aaPredicted RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 PWP1Q13610 501 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 RBBP5Q15291 538 aaKnown RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 NIPAL1Q6NVV3 410 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 RIPOR1Q6ZS17 1223 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms