RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ADGRG5Q8IZF4 528 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SVOPLQ8N434 492 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 AGR3Q8TD06 166 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 HCAR2Q8TDS4 363 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 STARD8Q92502 1023 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TUBGCP3Q96CW5 907 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ECHDC3Q96DC8 303 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PHF21BQ96EK2 531 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DTD2Q96FN9 168 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 HGH1Q9BTY7 390 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 BDH2Q9BUT1 245 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SHCBP1LQ9BZQ2 653 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ASB8Q9H765 288 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PHPT1Q9NRX4 125 aaPredicted RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DNAAF2Q9NVR5 837 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TOR4AQ9NXH8 423 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 LRIT1Q9P2V4 623 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ANAPC2Q9UJX6 822 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TMED5Q9Y3A6 229 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PLXNB3Q9ULL4 1909 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MDC1Q14676 2089 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 BSNQ9UPA5 3926 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF462Q96JM2 2506 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 IQCF5A8MTL0 148 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TXNDC9O14530 226 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DPM1O60762 260 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 IL6P05231 212 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CEACAM5P06731 702 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZCCHC18P0CG32 403 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF8P17098 575 aaPredicted RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ITGALP20701 1170 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CAPN3P20807 821 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MAPK1P28482 360 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MC4RP32245 332 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 HOXD12P35452 270 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZFP36L2P47974 494 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 KCNC1P48547 511 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SPINT3P49223 89 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 MAPK10P53779 464 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PFN3P60673 137 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ESRRGP62508 458 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TOP3AQ13472 1001 aaPredicted RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 IL18R1Q13478 541 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PEX6Q13608 980 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PWP1Q13610 501 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TUBA3CQ13748 450 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 NFATC4Q14934 902 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DPY19L1Q2PZI1 675 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SLC36A3Q495N2 470 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CTSL3PQ5NE16 218 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 AP1ARQ63HQ0 302 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZBTB49Q6ZSB9 765 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 LRRC70Q7Z2Q7 622 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZNF438Q7Z4V0 828 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TSPAN14Q8NG11 270 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CCDC74AQ96AQ1 378 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 RMND5BQ96G75 393 aaPredicted RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PLEKHG4BQ96PX9 1271 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZBTB18Q99592 522 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 GPR21Q99679 349 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CTRCQ99895 268 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CCDC3Q9BQI4 270 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 BOCQ9BWV1 1114 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 UGT2B28Q9BY64 529 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ZDHHC5Q9C0B5 715 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 TUBB1Q9H4B7 451 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ALG2Q9H553 416 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 COQ10BQ9H8M1 238 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 IMP3Q9NV31 184 aaKnown RBP4.59□□□□□ -1.67
EDEM3-203ENST00000439962 UBAP1Q9NZ09 502 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 USE1Q9NZ43 259 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 PKD2L2Q9NZM6 624 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 ATXN10Q9UBB4 475 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SPASTQ9UBP0 616 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 DKK3Q9UBP4 350 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SLC23A2Q9UGH3 650 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CRLS1Q9UJA2 301 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CRYL1Q9Y2S2 319 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 RAXQ9Y2V3 346 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 SLC30A1Q9Y6M5 507 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CFAP46Q8IYW2 2715 aa4.59□□□□□ -1.67
EDEM3-203ENST00000439962 CENPEQ02224 2701 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 UBA6A0AVT1 1052 aaPredicted RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RHPN2P1A8MT19 583 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 E5RI56 91 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NR5A2O00482 541 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ARPC2O15144 300 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 TNFSF14O43557 240 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 CBFA2T3O75081 653 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 SORBS2O94875 1100 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 SCELO95171 688 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RPLP0P05388 317 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 ALPPL2P10696 532 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 PRPS2P11908 318 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 NME1P15531 152 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 JUNBP17275 347 aaPredicted RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 EIF2S3P41091 472 aaKnown RBP4.59□□□□□ -1.68
EDEM3-203ENST00000439962 RXRGP48443 463 aa4.59□□□□□ -1.68
EDEM3-203ENST00000439962 HNMTP50135 292 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms