RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TTLL9Q3SXZ7 439 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ATP13A5Q4VNC0 1218 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CYP4Z2PQ8N1L4 340 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 RHEBL1Q8TAI7 183 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPR151Q8TDV0 419 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SNAPC3Q92966 411 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 TP53INP1Q96A56 240 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF641Q96N77 438 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC25A37Q9NYZ2 338 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 COMMD3Q9UBI1 195 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPASTQ9UBP0 616 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 DLGAP4Q9Y2H0 992 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 EEDO75530 441 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 IGSF6O95976 241 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 KRT6AP02538 564 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 KRT6BP04259 564 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 RRM2P31350 389 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 PREPP48147 710 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 KRT6CP48668 564 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 HOXC5Q00444 222 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ST3GAL4Q11206 333 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 NFATC2Q13469 925 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZC3H12BQ5HYM0 836 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 WDR45BQ5MNZ6 344 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 DLEU7Q6UYE1 221 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 USP51Q70EK9 711 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF605Q86T29 641 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 PHYKPLQ8IUZ5 450 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SYT12Q8IV01 421 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CELF5Q8N6W0 485 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 HJURPQ8NCD3 748 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR9Q2Q8NGE9 314 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR5H6Q8NGV6 325 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 TUBA1CQ9BQE3 449 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SP140LQ9H930 580 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF334Q9HCZ1 680 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 HCFC1R1Q9NWW0 138 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SIRT5Q9NXA8 310 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 THUMPD1Q9NXG2 353 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 DNAJC27Q9NZQ0 273 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 DKK3Q9UBP4 350 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SARDHQ9UL12 918 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CARD8Q9Y2G2 431 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 NPIPB15A6NHN6 443 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 HOXB8P17481 243 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPLD1P80108 840 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPIBQ01892 262 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 RING1Q06587 406 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 NAE1Q13564 534 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CKAP5Q14008 2032 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACOX1Q15067 660 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 USP39Q53GS9 565 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CXorf57Q6NSI4 855 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 Q6ZVL8 140 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SHFQ7M4L6 423 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZFAND4Q86XD8 727 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 LAX1Q8IWV1 398 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CHST14Q8NCH0 376 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR8H1Q8NGG4 311 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ENKURQ8TC29 256 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 DYNC2LI1Q8TCX1 351 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 HSH2DQ96JZ2 352 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLX1AQ9BQ83 275 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 RLIMQ9NVW2 624 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ELOVL2Q9NXB9 296 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 AGAP5A6NIR3 686 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 HNRNPCL2B2RXH8 293 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 IFRD1O00458 451 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 VPS4BO75351 444 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 RPS17P08708 135 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 UMPSP11172 480 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 HTR1EP28566 365 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 PTGER1P34995 402 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 LMAN2Q12907 356 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF267Q14586 743 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 LRRC26Q2I0M4 334 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 DEFB115Q30KQ5 88 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 XKR6Q5GH73 641 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 PDZK1Q5T2W1 519 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 RAB43Q86YS6 212 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ELMOD1Q8N336 334 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPR26Q8NDV2 337 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 SETD9Q8NE22 299 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 KCNJ9Q92806 393 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 DIRAS2Q96HU8 199 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 TRIB3Q96RU7 358 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 MRPL9Q9BYD2 267 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 CREBZFQ9NS37 354 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACSL6Q9UKU0 697 aa9.6□□□□□ -0.87
CDC42SE1-202ENST00000439374 DHRS7Q9Y394 339 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms