RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DEF8Q6ZN54 512 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRR23CQ6ZRP0 262 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 DPPA4Q7L190 304 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLCO6A1Q86UG4 719 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC15A3Q8IY34 581 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 EPS8L2Q9H6S3 715 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 HMG20AQ9NP66 347 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 LATO43561 262 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TNFRSF21O75509 655 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 C1GALT1C1LP0DN25 315 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 JUPP14923 745 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 BLKP51451 505 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 GRIK2Q13002 908 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TMEM207Q6UWW9 146 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZFAND4Q86XD8 727 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TMEM102Q8N9M5 508 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ADAMTS15Q8TE58 950 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC22A18Q96BI1 424 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 DTD2Q96FN9 168 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 FARSBQ9NSD9 589 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 OAZ3Q9UMX2 235 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRSS51A0A1B0GVH4 220 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 DFNA5O60443 496 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRKD3O94806 890 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 HOXB6P17509 224 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PTSQ03393 145 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC9A5Q14940 896 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PON2Q15165 354 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ANKDD1AQ495B1 522 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 CDK20Q8IZL9 346 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 TRPV3Q8NET8 790 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR4K1Q8NGD4 311 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR5AK3PQ8NH89 298 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 VANGL1Q8TAA9 524 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 PHF21AQ96BD5 680 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF689Q96CS4 500 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 BIRC8Q96P09 236 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SDR39U1Q9NRG7 319 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 RPS6KB2Q9UBS0 482 aa11.18□□□□□ -0.62
TRAPPC9-202ENST00000438773 SCN10AQ9Y5Y9 1956 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDPK1O15530 556 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 LILRB3O75022 631 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF26P17031 533 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 CAPN3P20807 821 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TCTN1Q2MV58 587 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 BROXQ5VW32 411 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 GATAD2AQ86YP4 633 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 HIPK1Q86Z02 1210 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TTLQ8NG68 377 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 RGMAQ96B86 450 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 COQ7Q99807 217 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC17A9Q9BYT1 436 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZCCHC3Q9NUD5 404 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 DLGAP4Q9Y2H0 992 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 KLHL20Q9Y2M5 609 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 PSMD11O00231 422 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR10H3O60404 316 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 THRBP10828 461 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 KRT20P35900 424 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNHIT3Q15649 155 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 KCTD8Q6ZWB6 473 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 LARP4Q71RC2 724 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 EIF3MQ7L2H7 374 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 CHCHD4Q8N4Q1 142 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 LKAAEAR1Q8TD35 194 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 VPS35Q96QK1 796 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDP1Q9P0J1 537 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 EBF1Q9UH73 591 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 MRPS33Q9Y291 106 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 SNTNA6NMZ2 147 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ACOT8O14734 319 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TPD52L2O43399 206 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 RSL1D1O76021 490 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 FABP3P05413 133 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 AOAHP28039 575 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ACVR1Q04771 509 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TRAF3Q13114 568 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TEAD4Q15561 434 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 DUOXA1Q1HG43 343 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF605Q86T29 641 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC9A6Q92581 669 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 BRINP2Q9C0B6 783 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TOR3AQ9H497 397 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 TPT1P8Q9HAU6 139 aa11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 STOX2Q9P2F5 926 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC9-202ENST00000438773 CROCCQ5TZA2 2017 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRORSD1PA6NEY8 169 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 NUAK1O60285 661 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 FADS2O95864 444 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 SBK3P0C264 359 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms