RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FUCA1P04066 466 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 FAM58BPP0C7Q3 252 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 ACP5P13686 325 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 IGFALSP35858 605 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 RPL3P39023 403 aaKnown RBP24.7■■□□□ 1.54
CPNE1-216ENST00000437340 USP30Q70CQ3 517 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 CARM1Q86X55 608 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 BHLHE41Q9C0J9 482 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-216ENST00000437340 PITHD1Q9GZP4 211 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-216ENST00000437340 V9GYQ6 96 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 PRR23AA6NEV1 266 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 TGFB1P01137 390 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 GPX2P18283 190 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 COL9A1P20849 921 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 RPL10P27635 214 aaKnown RBP24.69■■□□□ 1.54
CPNE1-216ENST00000437340 MRPS21P82921 87 aaKnown RBP24.69■■□□□ 1.54
CPNE1-216ENST00000437340 MEF2AQ02078 507 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-216ENST00000437340 PON2Q15165 354 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 R3HCC1LQ7Z5L2 792 aaKnown RBP24.69■■□□□ 1.54
CPNE1-216ENST00000437340 ABHD11Q8NFV4 315 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 APOOQ9BUR5 198 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 ANKRD60Q9BZ19 345 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 BTBD1Q9H0C5 482 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 RHBGQ9H310 441 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 MAGIXQ9H6Y5 334 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 C8orf33Q9H7E9 229 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-216ENST00000437340 TAC3Q9UHF0 121 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 BTBD3Q9Y2F9 522 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 PCDHB11Q9Y5F2 797 aa24.69■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3DA0A087WVF3 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3IA0A087WXS9 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3EA0A087X179 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3KA0A087X1G2 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3FA6NER0 549 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-216ENST00000437340 PRR19A6NJB7 356 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3LB9A6J9 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 CACNB4O00305 520 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-216ENST00000437340 LINGO3P0C6S8 592 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3HP0C7X1 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 SERPINB1P30740 379 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 SFSWAPQ12872 951 aaKnown RBP24.68■■□□□ 1.54
CPNE1-216ENST00000437340 LEXMQ3ZCV2 418 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3GQ6DHY5 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3CQ6IPX1 549 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 ZNF621Q6ZSS3 439 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 GPR155Q7Z3F1 870 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TBC1D3Q8IZP1 549 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-216ENST00000437340 C10orf111Q8N326 155 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 TFAP2CQ92754 450 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 NCLNQ969V3 563 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 AIF1LQ9BQI0 150 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 SLC6A17Q9H1V8 727 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 OR51B5Q9H339 312 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 REEP4Q9H6H4 257 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 ZNF696Q9H7X3 374 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 NT5DC2Q9H857 520 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 MYNNQ9NPC7 610 aa24.68■■□□□ 1.54
CPNE1-216ENST00000437340 CFAP20Q9Y6A4 193 aaKnown RBP24.68■■□□□ 1.54
CPNE1-216ENST00000437340 PDLIM1O00151 329 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 RNASET2O00584 256 aaKnown RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 HOXC4P09017 264 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 ENGP17813 658 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 PPIBP23284 216 aaKnown RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 GRSF1Q12849 480 aaKnown RBP eCLIP24.67■■□□□ 1.543e-10■□□□□ 10.9
CPNE1-216ENST00000437340 PYCR3Q53H96 274 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 ERICH5Q6P6B1 374 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 PGBD3Q8N328 593 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 ZNF740Q8NDX6 193 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SNX19Q92543 992 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SH3KBP1Q96B97 665 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SIPA1Q96FS4 1042 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SCARF2Q96GP6 870 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 C12orf66Q96MD2 445 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 INSM2Q96T92 566 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 MYCBPQ99417 103 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 ATAD3AQ9NVI7 634 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 NCKAP1Q9Y2A7 1128 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 WDR37Q9Y2I8 494 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 PIAS3Q9Y6X2 628 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 F5P12259 2224 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 CCR8P51685 355 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 IER5LQ5T953 404 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 PTCRAQ6ISU1 281 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-216ENST00000437340 VN1R5Q7Z5H4 357 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 CLECL1Q8IZS7 167 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 EID3Q8N140 333 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 FBXO30Q8TB52 745 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 MTERF3Q96E29 417 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SLC47A1Q96FL8 570 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 SPATA9Q9BWV2 254 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 FAM192AQ9GZU8 254 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 AHSPQ9NZD4 102 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 CORO2BQ9UQ03 480 aa24.67■■□□□ 1.54
CPNE1-216ENST00000437340 DLGAP1O14490 977 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 YY2O15391 372 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 NARSO43776 548 aaKnown RBP24.66■■□□□ 1.54
CPNE1-216ENST00000437340 SEMA3DO95025 777 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 CCNDBP1O95273 360 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 CPSF4O95639 269 aaKnown RBP24.66■■□□□ 1.54
CPNE1-216ENST00000437340 PDE7AQ13946 482 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms