RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ATF6P18850 670 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 IGFBP6P24592 240 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 EPHA5P54756 1037 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 RRAS2P62070 204 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 OLR1P78380 273 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ASAH1Q13510 395 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 UAP1L1Q3KQV9 507 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ASB18Q6ZVZ8 466 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GPSM1Q86YR5 675 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TBC1D19Q8N5T2 526 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 AGBL3Q8NEM8 1001 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 HERVK_113Q902F9 699 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 UPRTQ96BW1 309 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CYP2S1Q96SQ9 504 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SEPT5Q99719 369 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 UQCC2Q9BRT2 126 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 MRIQ9BWK5 157 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 UXTQ9UBK9 157 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PCDHB7Q9Y5E2 793 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TRAV6A0A075B6T7 132 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARPC4-TTLL3A0A0A6YYG9 625 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 IQCF5A8MTL0 148 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PCDH17O14917 1159 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 NIPSNAP2O75323 286 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 RFPL3O75679 317 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 RETP07949 1114 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 FDXRP22570 491 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TIAL1Q01085 375 aaKnown RBP eCLIP7.22□□□□□ -1.259e-11■■■■■ 59.7
CPSF6-202ENST00000435070 PCBP1Q15365 356 aaKnown RBP eCLIP7.22□□□□□ -1.257e-11■□□□□ 8.4
CPSF6-202ENST00000435070 PTPRNQ16849 979 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 C22orf42Q6IC83 251 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 FRMPD2BQ6IN97 320 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 METTL2BQ6P1Q9 378 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SLC5A8Q8N695 610 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SYT14Q8NB59 555 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA1191Q96A73 305 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZFP42Q96MM3 310 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 FAM105AQ9NUU6 356 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TNPO3Q9Y5L0 923 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PRAMEF33A0A0G2JMD5 474 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 PRAMEF10O60809 474 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 PLATP00750 562 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 C9P02748 559 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 RPS17P08708 135 aaKnown RBP7.21□□□□□ -1.25
CPSF6-202ENST00000435070 CPN2P22792 545 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 ADRA1AP35348 466 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 HK3P52790 923 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 SRP54P61011 504 aaKnown RBP7.21□□□□□ -1.25
CPSF6-202ENST00000435070 ZXDBP98169 803 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 SEMA3BQ13214 749 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 P2RY14Q15391 338 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 FBXO43Q4G163 708 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 RNF130Q86XS8 419 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 SIDT2Q8NBJ9 832 aaKnown RBP7.21□□□□□ -1.25
CPSF6-202ENST00000435070 SMIM14Q96QK8 99 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 TFB2MQ9H5Q4 396 aaKnown RBP7.21□□□□□ -1.25
CPSF6-202ENST00000435070 CATSPERBQ9H7T0 1116 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 BEX1Q9HBH7 125 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 SLC9A8Q9Y2E8 581 aa7.21□□□□□ -1.25
CPSF6-202ENST00000435070 PRRG1O14668 218 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 MAFKO60675 156 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 APOL3O95236 402 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CPSF4O95639 269 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 PSMA1P25786 263 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 OR1E2P47887 323 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CDKN1CP49918 316 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GNA13Q14344 377 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF235Q14590 738 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 BHLHB9Q6PI77 547 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 TMIGD1Q6UXZ0 262 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF621Q6ZSS3 439 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 RRM2BQ7LG56 351 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 Q8N402 240 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 B3GALNT2Q8NCR0 500 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 FAM167AQ96KS9 214 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GTPBP2Q9BX10 602 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 YARS2Q9Y2Z4 477 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CENPFP49454 3210 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 A0A1B0GVC2 190 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 A6NIN4 97 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZBTB42B2RXF5 422 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ACADMP11310 421 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 NPR3P17342 541 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 B2MP61769 119 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 IL18Q14116 193 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 DGKKQ5KSL6 1271 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 MRNIPQ6NTE8 343 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 PAQR6Q6TCH4 344 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 TTLQ8NG68 377 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 USP7Q93009 1102 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZBED6CLQ96FA7 236 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 NUSAP1Q9BXS6 441 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SPATA6Q9NWH7 488 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SPATA2Q9UM82 520 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 KLK4Q9Y5K2 254 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 AHDC1Q5TGY3 1603 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms