RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 RAB2BQ8WUD1 216 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 EXT2Q93063 718 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 FBXW5Q969U6 566 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.04□□□□□ -0.32
SENP3-202ENST00000429205 CHFRQ96EP1 664 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 C19orf43Q9BQ61 176 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 FAM83CQ9BQN1 747 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 PELOQ9BRX2 385 aaKnown RBP13.04□□□□□ -0.32
SENP3-202ENST00000429205 ZCCHC2Q9C0B9 1178 aaKnown RBP13.04□□□□□ -0.32
SENP3-202ENST00000429205 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
SENP3-202ENST00000429205 COG4Q9H9E3 785 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 ANKHQ9HCJ1 492 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 IKZF3Q9UKT9 509 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
SENP3-202ENST00000429205 MAGED1Q9Y5V3 778 aaPredicted RBP13.04□□□□□ -0.32
SENP3-202ENST00000429205 A0A0X1KG70 313 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 TMEM82A0PJX8 343 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PMS2P1A4D2B8 440 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 SAGE2PA6NJ88 616 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 LINC00587B1AMM8 73 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PRMT5O14744 637 aaPredicted RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 PPM1BO75688 479 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 RBBP9O75884 186 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 MFN2O95140 757 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 MEOX2P50222 304 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 RPL14P50914 215 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 DGKQP52824 942 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 RUNDC3AQ59EK9 446 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CBARPQ8N350 705 aaPredicted RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 MAPK15Q8TD08 544 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CD200R1Q8TD46 325 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 SLC13A3Q8WWT9 602 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 KCNJ9Q92806 393 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 YTHDF1Q9BYJ9 559 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 DERL2Q9GZP9 239 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 SARS2Q9NP81 518 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 PCDHB16Q9NRJ7 776 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 DNAJC28Q9NX36 388 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 ELOVL2Q9NXB9 296 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CCDC59Q9P031 241 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 ZFR2Q9UPR6 939 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 TRBV5-4A0A0C4DH59 114 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 E5RI56 91 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 NPHS1O60500 1241 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 TSPAN12O95859 305 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
SENP3-202ENST00000429205 CD40LGP29965 261 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PTPN5P54829 565 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PRKAA1Q13131 559 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 POM121L1PQ3SYA9 428 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 TMEM65Q6PI78 240 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 BRAT1Q6PJG6 821 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CREB3L2Q70SY1 520 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 COMTD1Q86VU5 262 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 PARP8Q8N3A8 854 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CLDN19Q8N6F1 224 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 CCDC120Q96HB5 630 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 ZNF416Q9BWM5 594 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 STN1Q9H668 368 aaKnown RBP13.03□□□□□ -0.32
SENP3-202ENST00000429205 TRPV4Q9HBA0 871 aa13.03□□□□□ -0.32
SENP3-202ENST00000429205 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 UBXN8O00124 270 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 TSPAN4O14817 238 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
SENP3-202ENST00000429205 HBQ1P09105 142 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 ACADMP11310 421 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 MTHFD2P13995 350 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 ZNF7P17097 686 aaPredicted RBP13.02□□□□□ -0.33
SENP3-202ENST00000429205 TMEM11P17152 192 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 ACRV1P26436 265 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 RAB13P51153 203 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 CLCN7P51798 805 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 POLR2LP62875 67 aaKnown RBP13.02□□□□□ -0.33
SENP3-202ENST00000429205 RACK1P63244 317 aaKnown RBP13.02□□□□□ -0.33
SENP3-202ENST00000429205 CTBSQ01459 385 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 PPA1Q15181 289 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 PGS1Q32NB8 556 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 SLC9B1Q4ZJI4 515 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 FGD3Q5JSP0 725 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 TCTE1Q5JU00 501 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 ANKRD54Q6NXT1 300 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 EPGNQ6UW88 154 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 VITQ6UXI7 678 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 VN1R5Q7Z5H4 357 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 SLC22A9Q8IVM8 553 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 CARFQ8N187 725 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 PHTF2Q8N3S3 785 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 RHEBL1Q8TAI7 183 aa13.02□□□□□ -0.33
SENP3-202ENST00000429205 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms