RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TNFSF14O43557 240 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 SIGLEC6O43699 453 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 EEDO75530 441 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 KIAA0754O94854 1291 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 UNC5CO95185 931 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CCNDBP1O95273 360 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 SERPIND1P05546 499 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 ENGP17813 658 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CAPN3P20807 821 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 HOXD12P35452 270 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CAPZBP47756 277 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CCT8P50990 548 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 ABATP80404 500 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 TCF15Q12870 199 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 HIST2H2ACQ16777 129 aaPredicted RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 SLC5A12Q1EHB4 618 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PDCD4Q53EL6 469 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 HIST2H2AA3Q6FI13 130 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 FRMPD2BQ6IN97 320 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 NOXRED1Q6NXP6 359 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 IRGCQ6NXR0 463 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 FBXO42Q6P3S6 717 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 GUSBP11Q6P575 273 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 FAM92BQ6ZTR7 304 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 UBE3DQ7Z6J8 389 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 YTHDF3Q7Z739 585 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 SHISA5Q8N114 240 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 MIER2Q8N344 545 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 SDR16C5Q8N3Y7 309 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 EID2Q8N6I1 236 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 ARL10Q8N8L6 244 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 GBP7Q8N8V2 638 aaPredicted RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 Q8N9G6 341 aaPredicted RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 MFSD9Q8NBP5 474 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 RBM15BQ8NDT2 890 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 OR4C6Q8NH72 309 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CHTF18Q8WVB6 975 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CCDC74AQ96AQ1 378 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 RCN3Q96D15 328 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 REPS1Q96D71 796 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 TSSK3Q96PN8 268 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 SLC38A3Q99624 504 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 NPAS2Q99743 824 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 MAP3K3Q99759 626 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 CCT7Q99832 543 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 NT5DC2Q9H857 520 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 UCK1Q9HA47 277 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PRM3Q9NNZ6 103 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 FAM60AQ9NP50 221 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 LHX9Q9NQ69 397 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 SDR39U1Q9NRG7 319 aaPredicted RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 FAM86C1Q9NVL1 165 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 ASIC5Q9NY37 505 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
SMC6-204ENST00000428868 LRIT1Q9P2V4 623 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 VPS29Q9UBQ0 182 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PILRAQ9UKJ1 303 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PPT2Q9UMR5 302 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 TSC22D4Q9Y3Q8 395 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 PCDHGA4Q9Y5G9 962 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 GPR179Q6PRD1 2367 aa8.49□□□□□ -1.05
SMC6-204ENST00000428868 IGHV1OR21-1A0A087WYE8 117 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 LOC105369274A0A096LPK9 316 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 LOC102723532A0A0G2JNH3 316 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ANKDD1BA6NHY2 528 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SLC9B1P1A6NJY1 282 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 RHPN2P1A8MT19 583 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PLPP1O14494 284 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 NDUFS4O43181 175 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ZW10O43264 779 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 LRATO95237 230 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 C9P02748 559 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ESRRAP11474 423 aaPredicted RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 HSD3B1P14060 373 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 IDO1P14902 403 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ITGAXP20702 1163 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 CALB2P22676 271 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 CXCR2P25025 360 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 HSD3B2P26439 372 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ALDH4A1P30038 563 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 TIA1P31483 386 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMC6-204ENST00000428868 CPOXP36551 454 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PIK3CBP42338 1070 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 MRPL19P49406 292 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 DGKQP52824 942 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 STX1BP61266 288 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 KCNJ2P63252 427 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SLC25A3Q00325 362 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ZNF33BQ06732 778 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 CUL3Q13618 768 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 NR1D2Q14995 579 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 HERC3Q15034 1050 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SF3A2Q15428 464 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 GSTA3Q16772 222 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SMU1Q2TAY7 513 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms