RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 DYRK1BQ9Y463 629 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 HS3ST3B1Q9Y662 390 aa12.94□□□□□ -0.34
SNX3-204ENST00000426155 KCNE1BA0A087WTH5 132 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 ZNF860A6NHJ4 632 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 SGK494L7N484 410 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 NDUFS4O43181 175 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 JRKO75564 520 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 SERPIND1P05546 499 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 ZGLP1P0C6A0 271 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 MMP11P24347 488 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 GRK3P35626 688 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 GLRBP48167 497 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 HSPA7P48741 367 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 HNMTP50135 292 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 CSRP3P50461 194 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 ATP6V0D1P61421 351 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 REEP5Q00765 189 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 ILF2Q12905 390 aaKnown RBP12.93□□□□□ -0.34
SNX3-204ENST00000426155 TMEM214Q6NUQ4 689 aaKnown RBP12.93□□□□□ -0.34
SNX3-204ENST00000426155 GPSM1Q86YR5 675 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 AMER2Q8N7J2 671 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 ANKRD53Q8N9V6 530 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 SLC13A3Q8WWT9 602 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 KIAA1191Q96A73 305 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 MIEF2Q96C03 454 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 C8orf44Q96CB5 159 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 NXNL1Q96CM4 212 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 CRB3Q9BUF7 120 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 SLC25A23Q9BV35 468 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 FUT8Q9BYC5 575 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 CD274Q9NZQ7 290 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 HCN3Q9P1Z3 774 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 FBXL4Q9UKA2 621 aa12.93□□□□□ -0.34
SNX3-204ENST00000426155 HEMK1Q9Y5R4 338 aaPredicted RBP12.93□□□□□ -0.34
SNX3-204ENST00000426155 IGLV3-12A0A075B6K2 115 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 TRBC2A0A5B9 178 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 C4orf51C9J302 202 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 UBXN8O00124 270 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 PEX12O00623 359 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 TXNDC9O14530 226 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 PRAMEF4O60810 478 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 RDH16O75452 317 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 CEACAM4O75871 244 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 ALDOAP04075 364 aaKnown RBP12.92□□□□□ -0.34
SNX3-204ENST00000426155 C2P06681 752 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 CD63P08962 238 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 FAM153BP0C7A2 387 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 CRABP2P29373 138 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 SLC26A3P40879 764 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 SCTRP47872 440 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 OCA2Q04671 838 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 RBBP7Q16576 425 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 DCAF10Q5QP82 559 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 PRAMEF9Q5VWM5 478 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 FAAH2Q6GMR7 532 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 TCTN3Q6NUS6 607 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 NXPE4Q6UWF7 544 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 ASB18Q6ZVZ8 466 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 MED25Q71SY5 747 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 TBC1D1Q86TI0 1168 aaPredicted RBP12.92□□□□□ -0.34
SNX3-204ENST00000426155 ISCA2Q86U28 154 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 ZC3H7AQ8IWR0 971 aaKnown RBP12.92□□□□□ -0.34
SNX3-204ENST00000426155 KLHDC8AQ8IYD2 350 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 TMEM102Q8N9M5 508 aaPredicted RBP12.92□□□□□ -0.34
SNX3-204ENST00000426155 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 PDPRQ8NCN5 879 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 SLC44A1Q8WWI5 657 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 MVB12AQ96EY5 273 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 ATOH8Q96SQ7 321 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 PELI2Q9HAT8 420 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 C3orf18Q9UK00 162 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 NXT1Q9UKK6 140 aaKnown RBP12.92□□□□□ -0.34
SNX3-204ENST00000426155 CDC14AQ9UNH5 594 aa12.92□□□□□ -0.34
SNX3-204ENST00000426155 A0A096LPK6 155 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 OR2W5A6NFC9 320 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 POC1B-GALNT4F8VUJ3 575 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 AGPSO00116 658 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 SUV39H1O43463 412 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 DNAJB6O75190 326 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 SUPT3HO75486 399 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 NSA2O95478 260 aaKnown RBP12.91□□□□□ -0.34
SNX3-204ENST00000426155 LTA4HP09960 611 aaKnown RBP12.91□□□□□ -0.34
SNX3-204ENST00000426155 SLC35G6P0C7Q6 338 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 HNF4AP41235 474 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 AVPR1BP47901 424 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 RRADP55042 308 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 OLR1P78380 273 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 CDC16Q13042 620 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 FAM53BQ14153 422 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNX3-204ENST00000426155 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
SNX3-204ENST00000426155 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 ADNP2Q6IQ32 1131 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 KIRREL2Q6UWL6 708 aa12.91□□□□□ -0.34
SNX3-204ENST00000426155 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms