RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CPZQ66K79 652 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 TCTN3Q6NUS6 607 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 NIPAL1Q6NVV3 410 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 NXPE4Q6UWF7 544 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
USP49-204ENST00000423567 PRICKLE2Q7Z3G6 844 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 PRSS58Q8IYP2 241 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 KRT78Q8N1N4 520 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 DTWD1Q8N5C7 304 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 OR4K1Q8NGD4 311 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ZCCHC10Q8TBK6 192 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 STT3BQ8TCJ2 826 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 PAFAH2Q99487 392 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SPSB2Q99619 263 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 CRB3Q9BUF7 120 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SARGQ9BW04 601 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 TRIM55Q9BYV6 548 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ALG9Q9H6U8 611 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ANKHQ9HCJ1 492 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SNX15Q9NRS6 342 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 DNAJC11Q9NVH1 559 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 P4HTMQ9NXG6 502 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 GPRC5BQ9NZH0 403 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 NUDT4Q9NZJ9 180 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 MAP4K5Q9Y4K4 846 aa10.4□□□□□ -0.74
USP49-204ENST00000423567 SNRNP200O75643 2136 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 A0A096LPK6 155 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 VSTM2BA6NLU5 285 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 H0YIG0 161 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 AGPSO00116 658 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 SLC28A2O43868 658 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 LCMT2O60294 686 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 CCNT2O60583 730 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 KERAO60938 352 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 NSA2O95478 260 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 C2P06681 752 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 CNTFP26441 200 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 AHRP35869 848 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 GDF5P43026 501 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 SCTRP47872 440 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 FOXL2P58012 376 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 REEP5Q00765 189 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 KLC1Q07866 573 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PWP1Q13610 501 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 HERC3Q15034 1050 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PDK4Q16654 411 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 DCAF10Q5QP82 559 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 IRAK1BP1Q5VVH5 260 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 TMEM214Q6NUQ4 689 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 SHISA6Q6ZSJ9 500 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 ASB18Q6ZVZ8 466 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 ABHD13Q7L211 337 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PPP1R32Q7Z5V6 425 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PTRH1Q86Y79 214 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 KLHDC8AQ8IYD2 350 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PDPRQ8NCN5 879 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 TRPV3Q8NET8 790 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 TTLQ8NG68 377 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 SLC44A1Q8WWI5 657 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 TM4SF19Q96DZ7 209 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 MACROD1Q9BQ69 325 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 VPS11Q9H270 941 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 ATP13A2Q9NQ11 1180 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 IGSF5Q9NSI5 407 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 C3orf18Q9UK00 162 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 TP53TG5Q9Y2B4 290 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PCDHGB7Q9Y5F8 929 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 PCDHGA9Q9Y5G4 932 aaKnown RBP10.39□□□□□ -0.75
USP49-204ENST00000423567 SLC22A7Q9Y694 548 aa10.39□□□□□ -0.75
USP49-204ENST00000423567 IGLV3-12A0A075B6K2 115 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 A6NL46 340 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 MAP2K7O14733 419 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 PCDH17O14917 1159 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 FOXS1O43638 330 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 KLHL2O95198 593 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 ALPPP05187 535 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 HEXBP07686 556 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 ABHD2P08910 425 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 C1GALT1C1LP0DN25 315 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 ACPPP15309 386 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 IL1RNP18510 177 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
USP49-204ENST00000423567 GSTM2P28161 218 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 HPDP32754 393 aaPredicted RBP10.38□□□□□ -0.75
USP49-204ENST00000423567 GGT5P36269 586 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 HSPA7P48741 367 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 EMP2P54851 167 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 KLRB1Q12918 225 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 ACAP2Q15057 778 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 VWA2Q5GFL6 755 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 PAGE2BQ5JRK9 111 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 TEX35Q5T0J7 233 aa10.38□□□□□ -0.75
USP49-204ENST00000423567 MFSD4BQ5TF39 518 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms