RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 CD72P21854 359 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 RGS4P49798 205 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 CDH12P55289 794 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 HOXC5Q00444 222 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 TMPRSS11AQ6ZMR5 421 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 PRR23CQ6ZRP0 262 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 GPR155Q7Z3F1 870 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 ZNF598Q86UK7 904 aaKnown RBP16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 STK40Q8N2I9 435 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 SYNPOQ8N3V7 929 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 ATAD1Q8NBU5 361 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 WDR36Q8NI36 951 aaKnown RBP16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 SUSD3Q96L08 255 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 FBXO44Q9H4M3 255 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 SNTG1Q9NSN8 517 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 IMPAD1Q9NX62 359 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
NPC1L1-203ENST00000423141 H7C0S8 307 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 PLK4O00444 970 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 TWF1Q12792 350 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 TAF10Q12962 218 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 CSTF3Q12996 717 aaKnown RBP16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 ERAP2Q6P179 960 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 SLC38A6Q8IZM9 456 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 UBASH3BQ8TF42 649 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 RASSF5Q8WWW0 418 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 CRELD1Q96HD1 420 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 OPALINQ96PE5 141 aa16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 AFF4Q9UHB7 1163 aaKnown RBP16.08■□□□□ 0.17
NPC1L1-203ENST00000423141 CHD5Q8TDI0 1954 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 ZSCAN5BA6NJL1 495 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 F5H5T6 163 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 GCM2O75603 506 aaPredicted RBP16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 PRAMEF1O95521 474 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 IGLV3-27P01718 113 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 EXOC3L2Q2M3D2 409 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 ERICH5Q6P6B1 374 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 PAMR1Q6UXH9 720 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 LGI4Q8N135 537 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 GPC2Q8N158 579 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 ADGRE3Q9BY15 652 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 SLC29A3Q9BZD2 475 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 TPT1P8Q9HAU6 139 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 C3orf14Q9HBI5 128 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 PCDHB1Q9Y5F3 818 aa16.08■□□□□ 0.16
NPC1L1-203ENST00000423141 FAM25AB3EWG3 89 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 FAM25CB3EWG5 89 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 FAM25GB3EWG6 89 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 WWP2O00308 870 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 PDHXO00330 501 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 CKMT1AP12532 417 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 PXNP49023 591 aaPredicted RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 MTAPQ13126 283 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 TUSC3Q13454 348 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GRB14Q14449 540 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 EIF4HQ15056 248 aaKnown RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 DUSP7Q16829 419 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 NOXRED1Q6NXP6 359 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 RNF130Q86XS8 419 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GRPEL2Q8TAA5 225 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 UBTD2Q8WUN7 234 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GTPBP3Q969Y2 492 aaKnown RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GPR63Q9BZJ6 419 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 C11orf54Q9H0W9 315 aaPredicted RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 MAGEH1Q9H213 219 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 HHATLQ9HCP6 504 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 FZD4Q9ULV1 537 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 PCDHB9Q9Y5E1 797 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 J3KTA2 159 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 GAPDHSO14556 408 aaPredicted RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 DDNO94850 711 aaPredicted RBP16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 HLA-EP13747 358 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 DGKAP23743 735 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 SGSHP51688 502 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 SPIBQ01892 262 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 MXD1Q05195 221 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 ELMOD2Q8IZ81 293 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 ADGRG2Q8IZP9 1017 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 ZBTB2Q8N680 514 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 SH3KBP1Q96B97 665 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 RIPOR3Q96MK2 946 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 PADI2Q9Y2J8 665 aa16.07■□□□□ 0.16
NPC1L1-203ENST00000423141 LOC105371267A0A1B0GV96 52 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 PRAMEF25A6NGN4 478 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 OR6C70A6NIJ9 312 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 M0QZ92 97 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 PRAMEF4O60810 478 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 LAMP1P11279 417 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 COX7A2P14406 83 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 ZNF7P17097 686 aaPredicted RBP16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 AMD1P17707 334 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 EFR3AQ14156 821 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 DSC3Q14574 896 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 TIMM50Q3ZCQ8 353 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 WDR45BQ5MNZ6 344 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 PRAMEF9Q5VWM5 478 aa16.06■□□□□ 0.16
NPC1L1-203ENST00000423141 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms