RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 MRPL9Q9BYD2 267 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 OR2B2Q9GZK3 357 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 USP44Q9H0E7 712 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 NEUROG2Q9H2A3 272 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 RMND5AQ9H871 391 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAGEF1Q9HAY2 307 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCDH9Q9HC56 1237 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 XAB2Q9HCS7 855 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MKKSQ9NPJ1 570 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 DDX4Q9NQI0 724 aaKnown RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 C8orf4Q9NR00 106 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC6A13Q9NSD5 602 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MRGBPQ9NV56 204 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC38A7Q9NVC3 462 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MCM9Q9NXL9 1143 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMOD2Q9NZR1 351 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM9Q9P0T7 183 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 UBA2Q9UBT2 640 aaPredicted RBP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 LGALS13Q9UHV8 139 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 MOSPD1Q9UJG1 213 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDH7Q9ULB5 785 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 VANGL2Q9ULK5 521 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CFL2Q9Y281 166 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 ERGIC3Q9Y282 383 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCDHAC2Q9Y5I4 1007 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CEPT1Q9Y6K0 416 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 CPDO75976 1380 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 PALLDQ8WX93 1383 aa3.25□□□□□ -1.89
SDCBPP3-201ENST00000419629 XRN1Q8IZH2 1706 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARHGAP5Q13017 1502 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF532Q9HCE3 1301 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLTCQ00610 1675 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MRC1P22897 1456 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 IGHV4OR15-8A0A075B7B6 117 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAGEB16A2A368 324 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARHGEF35A5YM69 484 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 GOLGA8IPA6NC78 632 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZSCAN5BA6NJL1 495 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MIF4GDA9UHW6 222 aaKnown RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM25AB3EWG3 89 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM25CB3EWG5 89 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM25GB3EWG6 89 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 E7EWF7 191 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF263O14978 683 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 BET1O15155 118 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACOX3O15254 700 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLOCKO15516 846 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 BUB1O43683 1085 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SCO2O43819 266 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SULT1C4O75897 302 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TM7SF2O76062 418 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 DDHD2O94830 711 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TMEM63AO94886 807 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 KDM4BO94953 1096 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TGDSO95455 350 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLDN14O95500 239 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FTCDO95954 541 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 IGLV2-11P01706 119 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CD48P09326 243 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SPARCP09486 303 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 HMOX1P09601 288 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF182P17025 639 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PRKACAP17612 351 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 SERPINB1P30740 379 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CHRNA3P32297 505 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 HSPA1LP34931 641 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 BSGP35613 385 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM23P36406 574 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CBX5P45973 191 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ALDH3B2P48448 385 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 DLX5P56178 289 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 IFI35P80217 286 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 PPP2R2BQ00005 443 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CAV1Q03135 178 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FOLH1Q04609 750 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 RAD51Q06609 339 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 KLRC3Q07444 240 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CETN1Q12798 172 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 GRSF1Q12849 480 aaKnown RBP eCLIP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CALCOCO2Q13137 446 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FGFBP1Q14512 234 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAPK6Q16659 721 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 C1orf146Q5VVC0 180 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 DUPD1Q68J44 220 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CGB2Q6NT52 195 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 RGMBQ6NW40 437 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 NEK5Q6P3R8 708 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 RFWD3Q6PCD5 774 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FBXO46Q6PJ61 603 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TSSK4Q6SA08 328 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCBE1Q6UXH8 406 aaPredicted RBP3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 LINC00299Q6ZSB3 139 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM47EQ6ZV65 393 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 RAPH1Q70E73 1250 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 TAS2R42Q7RTR8 314 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 HDDC2Q7Z4H3 204 aa3.24□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF589Q86UQ0 364 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms