RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 HSP90AA5PQ58FG0 334 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 TUBA3EQ6PEY2 450 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
RPS28-201ENST00000417088 MBOAT1Q6ZNC8 495 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 ASPGQ86U10 573 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 SLC26A11Q86WA9 606 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 C17orf64Q86WR6 236 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 RASGEF1CQ8N431 466 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 ZNF808Q8N4W9 903 aaPredicted RBP13.97□□□□□ -0.17
RPS28-201ENST00000417088 NAT8LQ8N9F0 302 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 MDS2Q8NDY4 140 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 ZCCHC10Q8TBK6 192 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 M1APQ8TC57 530 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 EEF1AKMT1Q8WVE0 214 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 SLC13A3Q8WWT9 602 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 NPAS2Q99743 824 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 ATG10Q9H0Y0 220 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 ANKHQ9HCJ1 492 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
RPS28-201ENST00000417088 SH3BGRL2Q9UJC5 107 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 PCDHGB6Q9Y5F9 930 aa13.97□□□□□ -0.17
RPS28-201ENST00000417088 FBN2P35556 2912 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 MAN1A2O60476 641 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 RDH16O75452 317 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 C8GP07360 202 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 NPPBP16860 134 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 CD96P40200 585 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 ST13P50502 369 aaKnown RBP13.96□□□□□ -0.17
RPS28-201ENST00000417088 RBPJQ06330 500 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 NAE1Q13564 534 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 EXT1Q16394 746 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 MEP1AQ16819 746 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 SFT2D3Q587I9 215 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 CAPN13Q6MZZ7 669 aaPredicted RBP13.96□□□□□ -0.17
RPS28-201ENST00000417088 LRRC8EQ6NSJ5 796 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 UGT3A1Q6NUS8 523 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 MTFR2Q6P444 385 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 PAPD4Q6PIY7 484 aaKnown RBP13.96□□□□□ -0.17
RPS28-201ENST00000417088 RPTNQ6XPR3 784 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 CRLF3Q8IUI8 442 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.96□□□□□ -0.173e-6■■■□□ 16.7
RPS28-201ENST00000417088 PLPP5Q8NEB5 264 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 MOCOSQ96EN8 888 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 SIGLEC12Q96PQ1 595 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 NDNQ99608 321 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 FAM167BQ9BTA0 163 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 SGPP1Q9BX95 441 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 HES7Q9BYE0 225 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 FAM129AQ9BZQ8 928 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 RUBCNLQ9H714 662 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 PARVBQ9HBI1 364 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 LANCL2Q9NS86 450 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 IARS2Q9NSE4 1012 aaKnown RBP13.96□□□□□ -0.17
RPS28-201ENST00000417088 NAALAD2Q9Y3Q0 740 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 SLC22A7Q9Y694 548 aa13.96□□□□□ -0.17
RPS28-201ENST00000417088 TTI1O43156 1089 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 SLC19A2O60779 497 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 CDH1P12830 882 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 CCND1P24385 295 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 GABRB3P28472 473 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 HTR1EP28566 365 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 RGS4P49798 205 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 RHAGQ02094 409 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 SP140Q13342 867 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 ABRAXAS2Q15018 415 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 NSDHLQ15738 373 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 C3AR1Q16581 482 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 PHKG1Q16816 387 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 ZNF630Q2M218 657 aaPredicted RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 ZXDCQ2QGD7 858 aaPredicted RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 SPINK14Q6IE38 97 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 AFAP1L2Q8N4X5 818 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 MFSD9Q8NBP5 474 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 C2CD4AQ8NCU7 369 aaPredicted RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 SCMH1Q96GD3 660 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 PEX11GQ96HA9 241 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 UTP23Q9BRU9 249 aaKnown RBP13.95□□□□□ -0.18
RPS28-201ENST00000417088 RBCK1Q9BYM8 510 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 MMP25Q9NPA2 562 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 KLHL1Q9NR64 748 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 ANKRD10Q9NXR5 420 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 OTOGQ6ZRI0 2925 aa13.95□□□□□ -0.18
RPS28-201ENST00000417088 ASPDHA6ND91 283 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 ZNF860A6NHJ4 632 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 MAGEB17A8MXT2 336 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 SLC16A5O15375 505 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 DNAJB6O75190 326 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
RPS28-201ENST00000417088 SLC35G6P0C7Q6 338 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 IL10P22301 178 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 GRK3P35626 688 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms