RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MAGEA8P43361 318 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ARFIP1P53367 373 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 CDH4P55283 916 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 RPP38P78345 283 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ST3GAL4Q11206 333 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF155Q12901 538 aaPredicted RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 C1orf52Q8N6N3 182 aaKnown RBP12.52□□□□□ -0.41
SCN1B-202ENST00000415950 BPIFB1Q8TDL5 484 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 ITPAQ9BY32 194 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 KCNN2Q9H2S1 579 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 CPQQ9Y646 472 aa12.52□□□□□ -0.41
SCN1B-202ENST00000415950 NFKBIEO00221 500 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 MPZL2O60487 215 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CHRNA1P02708 482 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ADH1AP07327 375 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 GIMD1P0DJR0 217 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 HCAR3P49019 387 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CLCN4P51793 760 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CHRNA6Q15825 494 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ARMC10Q8N2F6 343 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 FCGR1BQ92637 280 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 FATE1Q969F0 183 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 BIRC8Q96P09 236 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 HTATIP2Q9BUP3 242 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ADAMTS10Q9H324 1103 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 PAQR5Q9NXK6 330 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 LRRC72A6NJI9 287 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ERN1O75460 977 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 GJB3O75712 270 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 PRLP01236 227 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 EPHX1P07099 455 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ALDOCP09972 364 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 SMIM18P0DKX4 95 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 HOXD12P35452 270 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 LEPRP48357 1165 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 FLT3LGP49771 235 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 XKP51811 444 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 CREMQ03060 361 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 METTL3Q86U44 580 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 IGSF8Q969P0 613 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 TPT1P8Q9HAU6 139 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 LTB4R2Q9NPC1 389 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 NECTIN3Q9NQS3 549 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 DEC1Q9P2X7 70 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 RPL36Q9Y3U8 105 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 A6NL46 340 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ANXA2P2A6NMY6 339 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 TLX2O43763 284 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 NFE2L1Q14494 772 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 TAF1AQ15573 450 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 LSMEM2Q8N112 164 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 MINDY1Q8N5J2 469 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 KCTD13Q8WZ19 329 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 FARSBQ9NSD9 589 aaKnown RBP12.51□□□□□ -0.41
SCN1B-202ENST00000415950 SPAG17Q6Q759 2223 aa12.51□□□□□ -0.41
SCN1B-202ENST00000415950 A0A0G2JPF8 293 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 HTR3EA5X5Y0 456 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 HNRNPCL3B7ZW38 293 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SLC31A1O15431 190 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 HNRNPCL4P0DMR1 293 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 GJA1P17302 382 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 NSG1P42857 185 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TBRG1Q3YBR2 411 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TCEAL5Q5H9L2 206 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 VAPAQ9P0L0 249 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 NUP98P52948 1817 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PRH1P02810 166 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SCNN1AP37088 669 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SCARB2Q14108 478 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 CLCA4Q14CN2 919 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TCF7L1Q9HCS4 588 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 IGSF5Q9NSI5 407 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 POU2F3Q9UKI9 436 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 FKBP7Q9Y680 259 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 ILVBLA1L0T0 632 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 WRBO00258 174 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 C4orf46Q504U0 113 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 UBXN11Q5T124 520 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SLC8B1Q6J4K2 584 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms