RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 VIPR1P32241 457 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 KRT20P35900 424 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CDH12P55289 794 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 TMEM115Q12893 351 aaPredicted RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 IL18R1Q13478 541 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 GRIN2CQ14957 1233 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 MAD2L1BPQ15013 274 aaPredicted RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 PKP4Q99569 1192 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 PCDHGA12O60330 932 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 FGF18O76093 207 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CDH3P22223 829 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 HOXA9P31269 272 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 SPIBQ01892 262 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 MTAPQ13126 283 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 SP140Q13342 867 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ZNF846Q147U1 533 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 DGUOKQ16854 277 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 TMC8Q8IU68 726 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 C11orf65Q8NCR3 313 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ZNF347Q96SE7 839 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 FEVQ99581 238 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ALOXE3Q9BYJ1 711 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CPEB1Q9BZB8 566 aaKnown RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 TRIM39Q9HCM9 518 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 M0QX08 132 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ATG13O75143 517 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 C6orf47O95873 294 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 C9P02748 559 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 IMPA1P29218 277 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 HPCAL1P37235 193 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 NTHL1P78549 312 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 LRRC74AQ0VAA2 488 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 CSTF3Q12996 717 aaKnown RBP13.32□□□□□ -0.28
NUB1-201ENST00000413040 RGNQ15493 299 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 COX20Q5RI15 118 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ZDHHC20Q5W0Z9 365 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 WDR20Q8TBZ3 569 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ATL1Q8WXF7 558 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 ING5Q8WYH8 240 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 IRF7Q92985 503 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 POLE4Q9NR33 117 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 KLHL42Q9P2K6 505 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
NUB1-201ENST00000413040 LOC100506127A0A0U1RQW1 187 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 EIF3FO00303 357 aaPredicted RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 SGTAO43765 313 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 GSTM1P09488 218 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 CSF2RAP15509 400 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 POU1F1P28069 291 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 CD6P30203 668 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 HNF4AP41235 474 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 BCAP31P51572 246 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 GSTM4Q03013 218 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 C2orf80Q0P641 193 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 DNASE1L3Q13609 305 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 ZC3H12BQ5HYM0 836 aaKnown RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 TMEM215Q68D42 235 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 SVOPQ8N4V2 548 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 CIDECQ96AQ7 238 aaPredicted RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 ZHX1-C8orf76Q96EF9 292 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 COPS4Q9BT78 406 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 TBCCD1Q9NVR7 557 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 MAGP20916 626 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 CHI3L1P36222 383 aaPredicted RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 HBA1P69905 142 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
NUB1-201ENST00000413040 GANABQ14697 944 aaKnown RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 MED27Q6P2C8 311 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 TTC23LQ6PF05 361 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 BRAT1Q6PJG6 821 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
NUB1-201ENST00000413040 OR8J2Q8NGG1 315 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 BTN2A2Q8WVV5 523 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 DNASE1L2Q92874 299 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 DUSP21Q9H596 190 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 ACOT13Q9NPJ3 140 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 TMEM184CQ9NVA4 438 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 RAB23Q9ULC3 237 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 PRKAB1Q9Y478 270 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 HCFC2Q9Y5Z7 792 aa13.31□□□□□ -0.28
NUB1-201ENST00000413040 PLK4O00444 970 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 SLC16A5O15375 505 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 DBTP11182 482 aaKnown RBP13.3□□□□□ -0.28
NUB1-201ENST00000413040 TIMP2P16035 220 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 HOXB9P17482 250 aaPredicted RBP13.3□□□□□ -0.28
NUB1-201ENST00000413040 SERPINB10P48595 397 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 RELAQ04206 551 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 ZNF385BQ569K4 471 aa13.3□□□□□ -0.28
NUB1-201ENST00000413040 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
NUB1-201ENST00000413040 CACUL1Q86Y37 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms