RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZNF148Q9UQR1 794 aa5.15□□□□□ -1.59
LINC00342-201ENST00000412393 WDR37Q9Y2I8 494 aa5.15□□□□□ -1.59
LINC00342-201ENST00000412393 ZNF711Q9Y462 761 aa5.15□□□□□ -1.59
LINC00342-201ENST00000412393 ARHGAP10A1A4S6 786 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CCDC162PA2VCL2 907 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TRIM64BA6NI03 449 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SMIM23A6NLE4 172 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TRIM64CA6NLI5 447 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 EIF4E1BA6NMX2 242 aaKnown RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 E9PBE3 544 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 AGRPO00253 132 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 MATN2O00339 956 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PPM1DO15297 605 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 MTSS1O43312 755 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 LIASO43766 372 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 E2F6O75461 281 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 KRT36O76013 467 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 KLHL2O95198 593 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLC25A14O95258 325 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 MT-CYBP00156 380 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLC4A1P02730 911 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TFAP2AP05549 437 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SERPINA6P08185 405 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PIRTP0C851 137 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 JMJD7P0C870 316 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 HGFP14210 728 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CD1CP29017 333 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PRDX6P30041 224 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLC5A2P31639 672 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 UGT1A5P35504 534 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 GPR3P46089 330 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PPM1FP49593 454 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 UCNP55089 124 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TMPRSS3P57727 454 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 DCDC1P59894 354 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ZFP36L1Q07352 338 aaKnown RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 WASHC5Q12768 1159 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CYLC2Q14093 348 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 NR1D2Q14995 579 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 OASLQ15646 514 aaKnown RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CLPPQ16740 277 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ANKRD20A4Q4UJ75 823 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 RNASEH2BQ5TBB1 312 aaKnown RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 IZUMO3Q5VZ72 239 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 METTL21CQ5VZV1 264 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PDPK2PQ6A1A2 396 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 AADACL2Q6P093 401 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TIFABQ6ZNK6 161 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 Q6ZPA2 131 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 FAM47EQ6ZV65 393 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 BBS12Q6ZW61 710 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CCDC80Q76M96 950 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CHST15Q7LFX5 561 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PID1Q7Z2X4 250 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TMPRSS9Q7Z410 1059 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PIM3Q86V86 326 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CCDC25Q86WR0 208 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TICAM1Q8IUC6 712 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ZBED8Q8IZ13 594 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ZNF567Q8N184 647 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TRAM1L1Q8N609 369 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 FAM169BQ8N8A8 192 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SMYD1Q8NB12 490 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 GPR26Q8NDV2 337 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLC35B2Q8TB61 432 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ADAMTS16Q8TE57 1224 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLC37A2Q8TED4 501 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 WDR60Q8WVS4 1066 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 MCUR1Q96AQ8 359 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TMEM159Q96B96 161 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TADA1Q96BN2 335 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 HAUS1Q96CS2 278 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 EID2BQ96D98 161 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 OXNAD1Q96HP4 312 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 BIRC8Q96P09 236 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 BBC3Q96PG8 261 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SRPK1Q96SB4 655 aaKnown RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CMKLR1Q99788 373 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SLX1AQ9BQ83 275 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 NUDT22Q9BRQ3 303 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 ZSCAN5AQ9BUG6 496 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CCDC106Q9BWC9 280 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TSSK1BQ9BXA7 367 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 HEMGNQ9BXL5 484 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 KLHL4Q9C0H6 718 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 RDH14Q9HBH5 336 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CPNE5Q9HCH3 593 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 S100A14Q9HCY8 104 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 NDE1Q9NXR1 346 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TUBA8Q9NY65 449 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 HACD3Q9P035 362 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 AKAP7Q9P0M2 348 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 C6orf203Q9P0P8 240 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 KLHL8Q9P2G9 620 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 NFKBIL1Q9UBC1 381 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PISDQ9UG56 409 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 TAGLN3Q9UI15 199 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 RAB26Q9ULW5 256 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PRKAB1Q9Y478 270 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 LOXL2Q9Y4K0 774 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms