RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GRID2O43424 1007 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SPRY3O43610 288 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 KIF5CO60282 957 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ZIC3O60481 467 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TBX19O60806 448 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SOX30O94993 753 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 LIPFP07098 398 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 PROS1P07225 676 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ASNSP08243 561 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 NUDT17P0C025 328 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TNNI3P19429 210 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 CALB2P22676 271 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SSTR1P30872 391 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 RPL3P39023 403 aaKnown RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 CTSCP53634 463 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 CLDN20P56880 219 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SSTP61278 116 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 MAT1AQ00266 395 aaKnown RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 MECOMQ03112 1051 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SULT2A1Q06520 285 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 PNRC1Q12796 327 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TRAF1Q13077 416 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TWIST1Q15672 202 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 KIF19Q2TAC6 998 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 PPP6R3Q5H9R7 873 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 FOXRED2Q8IWF2 684 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 AADATQ8N5Z0 425 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 BCORP1Q8N888 145 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 BMPERQ8N8U9 685 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 NRACQ8N912 160 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 STKLD1Q8NE28 680 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ACVR1CQ8NER5 493 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 CCDC148Q8NFR7 591 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 AKR7LQ8NHP1 331 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 SLC26A7Q8TE54 656 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 DNAAF4Q8WXU2 420 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF583Q96ND8 569 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 GSDMAQ96QA5 445 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 GPA33Q99795 319 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 BTBD10Q9BSF8 475 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
BRCA1-204ENST00000412061 FTHL17Q9BXU8 183 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 NMNAT2Q9BZQ4 307 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TRPV6Q9H1D0 765 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TRPC7Q9HCX4 862 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 GSN-AS1Q9NRJ2 163 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ELOVL5Q9NYP7 299 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 PKD2L2Q9NZM6 624 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 TINAGQ9UJW2 476 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 PADI3Q9ULW8 664 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 CLEC4AQ9UMR7 237 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 KLK4Q9Y5K2 254 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 DISP3Q9P2K9 1392 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 A0A0U1RQV5 110 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 DNAJC9-AS1A6NH13 148 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 LACTBL1A8MY62 500 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TMEM150CB9EJG8 249 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TIMM23O14925 209 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 HSPA12AO43301 675 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CSO75390 466 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CSDE1O75534 798 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 IL1BP01584 269 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 UGT2B4P06133 528 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 HMBSP08397 361 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 IQCF3P0C7M6 154 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 HAPLN1P10915 354 aaPredicted RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 RALAP11233 206 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PSG1P11464 419 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 B4GALT1P15291 398 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 GALP22466 123 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 JAK1P23458 1154 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 ITGA3P26006 1051 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PPP2R1AP30153 589 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CCR1P32246 355 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 RFX2P48378 723 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PRRX1P54821 245 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 AIF1P55008 147 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 HNRNPH2P55795 449 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 ACTR3P61158 418 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 FKBP1BP68106 108 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CCZ1BP86790 482 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CCZ1P86791 482 aaPredicted RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 DMTNQ08495 405 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 HNF4GQ14541 408 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 NONOQ15233 471 aaKnown RBP eCLIP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 EFNB3Q15768 340 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TPD52L1Q16890 204 aaPredicted RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 FNBP1LQ5T0N5 605 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 C11orf63Q6NUN7 778 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PLXDC2Q6UX71 529 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 DLK2Q6UY11 383 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 SLC16A9Q7RTY1 509 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TMPRSS12Q86WS5 348 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CERS5Q8N5B7 392 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 C1orf52Q8N6N3 182 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 SIDT2Q8NBJ9 832 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TRIM58Q8NG06 486 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms