RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TIMP1P01033 207 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IGHV2-70P01814 119 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NR3C1P04150 777 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 EDN1P05305 212 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 F7P08709 466 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SUPT20HL2P0C7V6 817 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPP1P10451 314 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PDGFRAP16234 1089 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF12P17014 697 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ITGA2P17301 1181 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PTPN3P26045 913 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PPP2R1AP30153 589 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HOXA11P31270 313 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HOXC13P31276 330 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RFC2P35250 354 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TCF7P36402 384 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PPP5CP53041 499 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MAPK12P53778 367 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 BACE1P56817 501 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PPARDQ03181 441 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TRAF3Q13114 568 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ITGA7Q13683 1181 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF273Q14593 569 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 WDR43Q15061 677 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SHHQ15465 462 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NPTX1Q15818 432 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RBBP7Q16576 425 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LRRC26Q2I0M4 334 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SETMARQ53H47 684 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FGD3Q5JSP0 725 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM91A1Q658Y4 838 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 APOBEC3HQ6NTF7 200 aaKnown RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC27A1Q6PCB7 646 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TEX38Q6PEX7 206 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PIWIL4Q7Z3Z4 852 aaKnown RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ABI3BPQ7Z7G0 1075 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IQCA1Q86XH1 822 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLD3Q8IV08 490 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM114A1Q8IWE2 563 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C10orf53Q8N6V4 93 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RASGEF1AQ8N9B8 481 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TRIML1Q8N9V2 468 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC4A11Q8NBS3 891 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ATAD1Q8NBU5 361 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR13C3Q8NGS6 347 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CTCFLQ8NI51 663 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SEPT1Q8WYJ6 367 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TM9SF4Q92544 642 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PROX1Q92786 737 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF354BQ96LW1 612 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FER1L6-AS2Q96M78 137 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GLT1D1Q96MS3 346 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 JAKMIP1Q96N16 626 aaKnown RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MUS81Q96NY9 551 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FEVQ99581 238 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CPNE1Q99829 537 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RTP3Q9BQQ7 232 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPRY4Q9C004 299 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GPR88Q9GZN0 384 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 VN1R1Q9GZP7 353 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZMYND12Q9H0C1 365 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IL25Q9H293 177 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SNX25Q9H3E2 840 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GAREM1Q9H706 876 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GSN-AS1Q9NRJ2 163 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SERINC1Q9NRX5 453 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ABCB8Q9NUT2 735 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PRMT7Q9NVM4 692 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TMEM161AQ9NX61 479 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DDX43Q9NXZ2 648 aaKnown RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MIS18AQ9NYP9 233 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KLHL9Q9P2J3 617 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RHCGQ9UBD6 479 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ARMCX3Q9UH62 379 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC12A6Q9UHW9 1150 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ITGA11Q9UKX5 1188 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDH7Q9ULB5 785 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ICAM5Q9UMF0 924 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZFP37Q9Y6Q3 630 aaPredicted RBP2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PFASO15067 1338 aa2.42□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LAMB1P07942 1786 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MUC6Q6W4X9 2439 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CHD7Q9P2D1 2997 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ANKRD11Q6UB99 2663 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM149AA5PLN7 773 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR6C76A6NM76 312 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 E9PI62 339 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TRIM77I1YAP6 450 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLC33A1O00400 549 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLOD2O00469 737 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ARPC2O15144 300 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 EPHB6O15197 1021 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DCXO43602 365 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PCDH7O60245 1069 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PRKNO60260 465 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CTSVO60911 334 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CRYAAP02489 173 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RLN1P04808 185 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HAPLN1P10915 354 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms