RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 A0A1W2PPI3 338 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 A0A1W2PPW3 197 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 A0A1W2PS18 150 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 FAM149AA5PLN7 773 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 ZSCAN5CA6NGD5 496 aaPredicted RBP4.75□□□□□ -1.65
LSM5-206ENST00000409987 SGK1O00141 431 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TEX28O15482 410 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 FLRT2O43155 660 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 SCGB2A1O75556 95 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 CXCL10P02778 98 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 CSN3P07498 182 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 SMIM18P0DKX4 95 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 SKILP12757 684 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 CDKN1AP38936 164 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 PITX1P78337 314 aaPredicted RBP4.75□□□□□ -1.65
LSM5-206ENST00000409987 CX3CL1P78423 397 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 DMPKQ09013 629 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 ILF3Q12906 894 aaKnown RBP eCLIP4.75□□□□□ -1.65
LSM5-206ENST00000409987 GPM6BQ13491 265 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 KIR2DS3Q14952 304 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 STXBP2Q15833 593 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 IZUMO4Q1ZYL8 232 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 ZNF852Q6ZMS4 543 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 NAGSQ8N159 534 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 KBTBD3Q8NAB2 608 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 PPFIBP2Q8ND30 876 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TMEM185AQ8NFB2 350 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 OR52M1Q8NGK5 317 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 BRSK1Q8TDC3 778 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 RNF139Q8WU17 664 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 DHX58Q96C10 678 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 EPSTI1Q96J88 318 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 MEIS3Q99687 375 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 SSX3Q99909 188 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 LRRC1Q9BTT6 524 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TPPP3Q9BW30 176 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TSPYL1Q9H0U9 437 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TMEM245Q9H330 911 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 TFB2MQ9H5Q4 396 aaKnown RBP4.75□□□□□ -1.65
LSM5-206ENST00000409987 MAGEF1Q9HAY2 307 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 APOBEC3GQ9HC16 384 aaKnown RBP4.75□□□□□ -1.65
LSM5-206ENST00000409987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.75□□□□□ -1.65
LSM5-206ENST00000409987 SMC3Q9UQE7 1217 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 PCDHGB1Q9Y5G3 927 aa4.75□□□□□ -1.65
LSM5-206ENST00000409987 PCDH11YQ9BZA8 1340 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 A0A087WZY1 265 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 ILVBLA1L0T0 632 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 E9PI62 339 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 E2F3O00716 465 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 GAPDHSO14556 408 aaPredicted RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 IDH1O75874 414 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 PRAMEF12O95522 483 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 PGK2P07205 417 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 SAGP10523 405 aaPredicted RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 TOP1P11387 765 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 MYL6BP14649 208 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 PTGER4P35408 488 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 HSD17B3P37058 310 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 MAGEB1P43366 347 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 FMO5P49326 533 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 HNRNPFP52597 415 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 MTCP1P56278 107 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 RPS18P62269 152 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 OVGP1Q12889 678 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 PPP1R8Q12972 351 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 GAGE5Q13069 117 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 GAGE6Q13070 117 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 SPP2Q13103 211 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 PDZK1IP1Q13113 114 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 GIT2Q14161 759 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 LRRC23Q53EV4 343 aaPredicted RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 ASPRV1Q53RT3 343 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 CCNYL2Q5T2Q4 361 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 CAPRIN2Q6IMN6 1127 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 ARSKQ6UWY0 536 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 ARHGAP22Q7Z5H3 698 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 NPEPL1Q8NDH3 523 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 CKAP2Q8WWK9 683 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 STAMBPL1Q96FJ0 436 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 MYADMQ96S97 322 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 ASCL2Q99929 193 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 NAPBQ9H115 298 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 CDH20Q9HBT6 801 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 TM9SF3Q9HD45 589 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 KCNMB3Q9NPA1 279 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 OLFML3Q9NRN5 406 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 ZNF701Q9NV72 531 aaPredicted RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 NMRK1Q9NWW6 199 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 HBS1LQ9Y450 684 aaKnown RBP4.74□□□□□ -1.65
LSM5-206ENST00000409987 DISP3Q9P2K9 1392 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 HECW2Q9P2P5 1572 aa4.74□□□□□ -1.65
LSM5-206ENST00000409987 TRIP12Q14669 1992 aaPredicted RBP4.73□□□□□ -1.65
LSM5-206ENST00000409987 IGLV5-45A0A087WSX0 123 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 A0A1W2PPK0 400 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 A0A1W2PRB8 838 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 MAGEB2O15479 319 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 ANKRD34CP0C6C1 535 aa4.73□□□□□ -1.65
LSM5-206ENST00000409987 THRBP10828 461 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms