RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PYCARDQ9ULZ3 195 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 BARX2Q9UMQ3 279 aaPredicted RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 BZW2Q9Y6E2 419 aaKnown RBP4.13□□□□□ -1.75
CLK1-203ENST00000409769 MYO7AQ13402 2215 aa4.13□□□□□ -1.75
CLK1-203ENST00000409769 FAM237BA0A1B0GVD1 139 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PRR23AA6NEV1 266 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 KCNN4O15554 427 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 B3GAT3O94766 335 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 GJB5O95377 273 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 MLYCDO95822 493 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 EGFP01133 1207 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PAEPP09466 180 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CCDC172P0C7W6 258 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 P4HA1P13674 534 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 HLA-DOBP13765 273 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CYP11B1P15538 503 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TYMPP19971 482 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 DGKAP23743 735 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CDH5P33151 784 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 BRCC3P46736 316 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 RXRGP48443 463 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SLC11A1P49279 550 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CDH8P55286 799 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TAS2R38P59533 333 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 YWHAEP62258 255 aaKnown RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 TNNC1P63316 161 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 EEF1A1P68104 462 aaKnown RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 RELQ04864 619 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 KLHL30Q0D2K2 578 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 EEF1A1P5Q5VTE0 462 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SNX30Q5VWJ9 437 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 WSCD1Q658N2 575 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PMS2CLQ68D20 193 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 ADAM5Q6NVV9 412 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 DCLRE1AQ6PJP8 1040 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TMEM270Q6UE05 265 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 GLDNQ6ZMI3 551 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 SCARA5Q6ZMJ2 495 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 FOXL2NBQ6ZUU3 175 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TMCO2Q7Z6W1 182 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 UNC93AQ86WB7 457 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TMEM173Q86WV6 379 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 KMT5CQ86Y97 462 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 DCUN1D3Q8IWE4 304 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CCDC170Q8IYT3 715 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CRYBG2Q8N1P7 616 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PDCL2Q8N4E4 241 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TTC39CQ8N584 583 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SLC4A11Q8NBS3 891 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 POC1AQ8NBT0 407 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PHOSPHO2Q8TCD6 241 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 KIAA1524Q8TCG1 905 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 TRPC4APQ8TEL6 797 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 ZNF606Q8WXB4 792 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 ORAI1Q96D31 301 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SENP8Q96LD8 212 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 QRFPRQ96P65 431 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PCDHB18PQ96TA0 734 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 PKMYT1Q99640 499 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 AGPAT1Q99943 283 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 RTP3Q9BQQ7 232 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 ELOVL4Q9GZR5 314 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 FKRPQ9H9S5 495 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 SEBOXQ9HB31 216 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 ACP6Q9NPH0 428 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 CWC15Q9P013 229 aaKnown RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 TMEM184BQ9Y519 407 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 ATP8B3O60423 1300 aa4.12□□□□□ -1.75
CLK1-203ENST00000409769 COL4A4P53420 1690 aaPredicted RBP4.12□□□□□ -1.75
CLK1-203ENST00000409769 PLXNA3P51805 1871 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 MYO16Q9Y6X6 1858 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 A0A087X0T9 212 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 KANSL1LA0AUZ9 987 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 ASPDHA6ND91 283 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 USP27XA6NNY8 438 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 A8MZ25 164 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 M0QZ24 198 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 O00370 1275 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CYB561D2O14569 222 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 HCRTO43612 131 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 RNASEH2AO75792 299 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 CALCAP01258 141 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 FAM228BP0C875 321 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 VDRP11473 427 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 GZMAP12544 262 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 KRT5P13647 590 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 IL7RP16871 459 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CD53P19397 219 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 LMO2P25791 158 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 CORO1AP31146 461 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 LHX1P48742 406 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 RPL34P49207 117 aaKnown RBP4.11□□□□□ -1.75
CLK1-203ENST00000409769 FUT6P51993 359 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 NDST1P52848 882 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 TAS2R40P59535 323 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 DCAF7P61962 342 aa4.11□□□□□ -1.75
CLK1-203ENST00000409769 PRAMEP78395 509 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms